Evidence map›Paper›PMID 27303795›Full record

ArticleActa crystallographica. Section D, Structural biology2016

Novel protein-inhibitor interactions in site 3 of Ca(2+)-bound S100B as discovered by X-ray crystallography.

Michael C Cavalier, Zephan Melville, Ehson Aligholizadeh, E Prabhu Raman, Wenbo Yu, Lei Fang, Milad Alasady, Adam D Pierce, Paul T Wilder, Alexander D MacKerell and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Influence of Calcium Ions on the Membrane Binding of S100B Protein.Langmuir : the ACS journal of surfaces and colloids · 2025
    Article
  2. Article
  3. Article
  4. Structural Basis for S100B Interaction with its Target Proteins.Journal of molecular and genetic medicine : an international journal of biomedical research · 2018
    Article
  5. X-ray crystal structure of human calcium-bound S100A1.Acta crystallographica. Section F, Structural biology communications · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Michael C CavalierDepartment of Biochemistry and Molecular Biology, Center for Biomolecular Therapeutics (CBT), University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Zephan MelvilleDepartment of Biochemistry and Molecular Biology, Center for Biomolecular Therapeutics (CBT), University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Ehson AligholizadehDepartment of Biochemistry and Molecular Biology, Center for Biomolecular Therapeutics (CBT), University of Maryland School of Medicine, Baltimore, MD 21201, USA.
E Prabhu RamanComputer Aided Drug Design Center, University of Maryland School of Pharmacy, Baltimore, MD 21201, USA.
Wenbo YuComputer Aided Drug Design Center, University of Maryland School of Pharmacy, Baltimore, MD 21201, USA.
Lei FangComputer Aided Drug Design Center, University of Maryland School of Pharmacy, Baltimore, MD 21201, USA.
Milad AlasadyDepartment of Biochemistry and Molecular Biology, Center for Biomolecular Therapeutics (CBT), University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Adam D PierceDepartment of Biochemistry and Molecular Biology, Center for Biomolecular Therapeutics (CBT), University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Paul T WilderDepartment of Biochemistry and Molecular Biology, Center for Biomolecular Therapeutics (CBT), University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Alexander D MacKerellComputer Aided Drug Design Center, University of Maryland School of Pharmacy, Baltimore, MD 21201, USA.
David J WeberDepartment of Biochemistry and Molecular Biology, Center for Biomolecular Therapeutics (CBT), University of Maryland School of Medicine, Baltimore, MD 21201, USA.
University of Maryland, Baltimore · USUniversity of Maryland Marlene and Stewart Greenebaum Comprehensive Cancer Center

Funding

Interdisciplinary Training Program Muscle BiologyT32AR007592 · NIAMS · UNIVERSITY OF MARYLAND BALTIMORE · PI Aikaterini Kontrogianni-Konstantopoulos · 1996 to 2026
$11.7M
Training Grant in Cancer BiologyT32CA154274 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI Toni M Antalis, CURT I CIVIN · 2011 to 2026
$6.8M
Restoration of Tumor Suppression Activity in Malignant MelanomaR01CA107331 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI WEBER, DAVID JOSEPH · 2006 to 2015
$5.4M
The Structure and Function of S100 ProteinsR01GM058888 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI WEBER, DAVID JOSEPH · 1999 to 2010
$3.4M
NCI NIH HHS R01 CA107331NCI NIH HHS T32 CA154274NIAMS NIH HHS T32 AR007592NIGMS NIH HHS R01 GM058888
6 · The paper itself

Abstract

Structure-based drug discovery is under way to identify and develop small-molecule S100B inhibitors (SBiXs). Such inhibitors have therapeutic potential for treating malignant melanoma, since high levels of S100B downregulate wild-type p53 tumor suppressor function in this cancer. Computational and X-ray crystallographic studies of two S100B-SBiX complexes are described, and both compounds (apomorphine hydrochloride and ethidium bromide) occupy an area of the S100B hydrophobic cleft which is termed site 3. These data also reveal novel protein-inhibitor interactions which can be used in future drug-design studies to improve SBiX affinity and specificity. Of particular interest, apomorphine hydrochloride showed S100B-dependent killing in melanoma cell assays, although the efficacy exceeds its affinity for S100B and implicates possible off-target contributions. Because there are no structural data available for compounds occupying site 3 alone, these studies contribute towards the structure-based approach to targeting S100B by including interactions with residues in site 3 of S100B.

Indexed as

Antineoplastic AgentsCell Line, TumorCrystallography, X-RayDrug DesignHumansMelanomaMolecular Docking SimulationS100 ProteinsSmall Molecule LibrariesAntineoplastic AgentsS100 ProteinsSmall Molecule Librariesdrug designinhibitormelanomaS100BX-ray crystallography

Identifiers

PMID27303795
PMCPMC4908867
OpenAlexW2397131095

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.