Evidence map›Paper›PMID 27303794›Full record

ArticleActa crystallographica. Section D, Structural biology2016

Thermal contraction of aqueous glycerol and ethylene glycol solutions for optimized protein-crystal cryoprotection.

Chen Shen, Ethan F Julius, Timothy J Tyree, David W Moreau, Hakan Atakisi, Robert E Thorne

Abstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Interplay of vitrification and ice formation in a cryoprotectant aqueous solution at low temperature.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Solvent flows, conformation changes and lattice reordering in a cold protein crystal.Acta crystallographica. Section D, Structural biology · 2019
    Article
  4. Article
  5. Article
  6. Article
  7. Measuring the Densities of Aqueous Glasses at Cryogenic Temperatures.Journal of visualized experiments : JoVE · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Chen ShenCornell University, Ithaca, NY 14853, USA.
Ethan F JuliusCornell University, Ithaca, NY 14853, USA.
Timothy J TyreeCornell University, Ithaca, NY 14853, USA.
David W MoreauPhysics Department, Cornell University, Ithaca, NY 14853, USA.
Hakan AtakisiPhysics Department, Cornell University, Ithaca, NY 14853, USA.
Robert E ThornePhysics Department, Cornell University, Ithaca, NY 14853, USA.

Funding

TRAINING IN MOLECULAR PHYSICS OF BIOLOGICAL SYSTEMST32GM008267 · NIGMS · CORNELL UNIVERSITY ITHACA · PI WANG, MICHELLE D. · 1988 to 2021
$9.6M
NIGMS NIH HHS T32 GM008267
6 · The paper itself

Abstract

The thermal contraction of aqueous cryoprotectant solutions on cooling to cryogenic temperatures is of practical importance in protein cryocrystallography and in biological cryopreservation. In the former case, differential contraction on cooling of protein molecules and their lattice relative to that of the internal and surrounding solvent may lead to crystal damage and the degradation of crystal diffraction properties. Here, the amorphous phase densities of aqueous solutions of glycerol and ethylene glycol at T = 77 K have been determined. Densities with accuracies of <0.5% to concentrations as low as 30%(w/v) were determined by rapidly cooling drops with volumes as small as 70 pl, assessing their optical clarity and measuring their buoyancy in liquid nitrogen-argon solutions. The use of these densities in contraction matching of internal solvent to the available solvent spaces is complicated by several factors, most notably the exclusion of cryoprotectants from protein hydration shells and the expected deviation of the contraction behavior of hydration water from bulk water. The present methods and results will assist in developing rational approaches to cryoprotection and an understanding of solvent behavior in protein crystals.

Indexed as

VitrificationCryopreservationCryoprotective AgentsEquipment DesignEthylene GlycolGlycerolProteinsSample SizeTemperatureWaterCryoprotective AgentsEthylene GlycolGlycerolProteinsWateraqueous solutionbuoyancycryocrystallographycryoflotationcryopreservationdensityexpansion matchingprotein crystallographythermal expansionvitreousvitrification

Identifiers

PMID27303794
PMCPMC8493611

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.