Evidence map›Paper›PMID 27303041›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Superresolution imaging reveals nanometer- and micrometer-scale spatial distributions of T-cell receptors in lymph nodes.

Ying S Hu, Hu Cang, Björn F Lillemeier

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
15.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 86 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Heterogeneity of Signaling Complex Nanostructure in T Cells Activated Via the T Cell Antigen Receptor.Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada · 2023
    Article
  14. Article
  15. Pre-organized landscape of T cell surface.Frontiers in immunology · 2023
    Review
  16. Article
  17. Radius measurement via super-resolution microscopy enables the development of a variable radii proximity labeling platform.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ying S HuNomis Center for Immunobiology and Microbial Pathogenesis, Salk Institute for Biological Studies, La Jolla, CA 92037; Waitt Advanced Biophotonics Center, Salk Institute for Biological Studies, La Jolla, CA 92037.
Hu CangWaitt Advanced Biophotonics Center, Salk Institute for Biological Studies, La Jolla, CA 92037 blillemeier@salk.edu hucang@salk.edu.
Björn F LillemeierNomis Center for Immunobiology and Microbial Pathogenesis, Salk Institute for Biological Studies, La Jolla, CA 92037; Waitt Advanced Biophotonics Center, Salk Institute for Biological Studies, La Jolla, CA 92037 blillemeier@salk.edu hucang@salk.edu.
Salk Institute for Biological Studies · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
Ultra Sensitive Single Molecule Spectroscopy With Plasmonic AntennasDP2EB020400 · NIBIB · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI CANG, HU · 2014 to 2014
$2.9M
Decipher membrane patterns in situ with super-resolution and dynamic microscopyDP2GM105455 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI LILLEMEIER, BJOERN F · 2012 to 2012
$2.9M
NCI NIH HHS P30 CA014195NIBIB NIH HHS DP2 EB020400NIGMS NIH HHS DP2 GM105455
6 · The paper itself

Abstract

T cells become activated when T-cell receptors (TCRs) recognize agonist peptides bound to major histocompatibility complex molecules on antigen-presenting cells. T-cell activation critically relies on the spatiotemporal arrangements of TCRs on the plasma membrane. However, the molecular organizations of TCRs on lymph node-resident T cells have not yet been determined, owing to the diffraction limit of light. Here we visualized nanometer- and micrometer-scale TCR distributions in lymph nodes by light sheet direct stochastic optical reconstruction microscopy (dSTORM) and structured illumination microscopy (SIM). This dSTORM and SIM approach provides the first evidence, to our knowledge, of multiscale reorganization of TCRs during in vivo immune responses. We observed nanometer-scale plasma membrane domains, known as protein islands, on naïve T cells. These protein islands were enriched within micrometer-sized surface areas that we call territories. In vivo T-cell activation caused the TCR territories to contract, leading to the coalescence of protein islands and formation of stable TCR microclusters.

Indexed as

AnimalsCytochromes cDiagnostic ImagingInsect ProteinsLymph NodesMice, TransgenicNanotechnologyPeptidesReceptors, Antigen, T-CellCytochromes cInsect ProteinsPeptidesReceptors, Antigen, T-Cellplasma membraneprotein clustersuperresolutionT-cell activationT-cell receptor

Identifiers

PMID27303041
PMCPMC4932922
OpenAlexW2421881253

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.