Evidence map›Paper›PMID 27302953›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins.

Baoyu Zhao, Chang Shu, Xinsheng Gao, Banumathi Sankaran, Fenglei Du, Catherine L Shelton, Andrew B Herr, Jun-Yuan Ji, Pingwei Li

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 175 citations in OpenAlex.

  1. Innate immunity: current understandings and future perspectives.Signal transduction and targeted therapy · 2026
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  5. Murine models of pulmonary fibrosis: mechanisms, limitations and translational insights.European respiratory review : an official journal of the European Respiratory Society · 2026
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  6. Therapeutic targeting of the cGAS-STING pathway in human disease.The Journal of clinical investigation · 2026
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  19. STING COPII ER Export Trafficking and Signaling Primed by Phosphorylation Switches.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  20. Article

53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Baoyu ZhaoDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843;
Chang ShuDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843; pingwei@tamu.edu cshu2005@hotmail.com.
Xinsheng GaoDepartment of Molecular and Cellular Medicine, College of Medicine, Texas A&M University Health Science Center, College Station, TX 77843;
Banumathi SankaranBerkeley Center for Structural Biology, Physical Biosciences Division, Lawrence Berkeley Laboratory, Berkeley, CA 94720;
Fenglei DuDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843;
Catherine L SheltonDivision of Immunobiology, Center for Systems Immunology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229; Division of Infectious Diseases, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229.
Andrew B HerrDivision of Immunobiology, Center for Systems Immunology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229; Division of Infectious Diseases, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229.
Jun-Yuan JiDepartment of Molecular and Cellular Medicine, College of Medicine, Texas A&M University Health Science Center, College Station, TX 77843;
Pingwei LiDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843; pingwei@tamu.edu cshu2005@hotmail.com.
Texas A&M University · USCincinnati Children's Hospital Medical Center · USTexas A&M Health Science Center · USLawrence Berkeley National Laboratory · US

Funding

Context-specific Functions of CDK8R01DK095013 · NIDDK · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI JI, JUN-YUAN · 2013 to 2017
$1.5M
The Structural Basis of Viral RNA Sensing by the RIG-I Like ReceptorsR01AI087741 · NIAID · TEXAS A&M UNIVERSITY · PI LI, PINGWEI · 2010 to 2014
$1.5M
NIAID NIH HHS R01 AI087741NIDDK NIH HHS R01 DK095013
6 · The paper itself

Abstract

Type I IFNs are key cytokines mediating innate antiviral immunity. cGMP-AMP synthase, ritinoic acid-inducible protein 1 (RIG-I)-like receptors, and Toll-like receptors recognize microbial double-stranded (ds)DNA, dsRNA, and LPS to induce the expression of type I IFNs. These signaling pathways converge at the recruitment and activation of the transcription factor IRF-3 (IFN regulatory factor 3). The adaptor proteins STING (stimulator of IFN genes), MAVS (mitochondrial antiviral signaling), and TRIF (TIR domain-containing adaptor inducing IFN-β) mediate the recruitment of IRF-3 through a conserved pLxIS motif. Here we show that the pLxIS motif of phosphorylated STING, MAVS, and TRIF binds to IRF-3 in a similar manner, whereas residues upstream of the motif confer specificity. The structure of the IRF-3 phosphomimetic mutant S386/396E bound to the cAMP response element binding protein (CREB)-binding protein reveals that the pLxIS motif also mediates IRF-3 dimerization and activation. Moreover, rotavirus NSP1 (nonstructural protein 1) employs a pLxIS motif to target IRF-3 for degradation, but phosphorylation of NSP1 is not required for its activity. These results suggest a concerted mechanism for the recruitment and activation of IRF-3 that can be subverted by viral proteins to evade innate immune responses.

Indexed as

Adaptor Proteins, Signal TransducingAdaptor Proteins, Vesicular TransportAmino Acid MotifsCREB-Binding ProteinHumansImmune EvasionImmunity, InnateInterferon Regulatory Factor-3Membrane ProteinsProtein DomainsRotavirusRotavirus InfectionsSTING ProteinViral Nonstructural ProteinsAdaptor Proteins, Signal TransducingAdaptor Proteins, Vesicular TransportCREB-Binding ProteinCREBBP protein, humanInterferon Regulatory Factor-3IRF3 protein, humanMAVS protein, humanMembrane Proteinsnsp1 protein, RotavirusSTING1 protein, humanSTING ProteinTICAM1 protein, humanViral Nonstructural Proteinscrystal structureinnate immunitysignalingtranscription factortype I interferon

Identifiers

PMID27302953
PMCPMC4914169
OpenAlexW2408788715

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.