Evidence map›Paper›PMID 27302833›Full record

ArticleGastroenterology2016

Frequent PIK3CA Mutations in Colorectal and Endometrial Tumors With 2 or More Somatic Mutations in Mismatch Repair Genes.

Stacey A Cohen, Emily H Turner, Mallory B Beightol, Angela Jacobson, Ted A Gooley, Stephen J Salipante, Sigurdis Haraldsdottir, Christina Smith, Sheena Scroggins, Jonathan F Tait and 9 more

Open access · greenAbstract read
In one paragraph

Article in Gastroenterology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  9. Correlation ofAnnals of translational medicine · 2021
    Article
  10. Review
  11. Review
  12. Next-generation sequencing reveals heterogeneous genetic alterations in key signaling pathways of mismatch repair deficient colorectal carcinomas.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Microsatellite Instability Is Associated With the Presence of Lynch Syndrome Pan-Cancer.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2019
    Article
  17. Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 1 country.

Stacey A CohenDepartment of Medicine, Division of Medical Oncology, University of Washington, Seattle, Washington; Fred Hutchinson Cancer Research Center, Clinical Research Division, Seattle, Washington.
Emily H TurnerDepartment of Laboratory Medicine, University of Washington, Seattle, Washington.
Mallory B BeightolDepartment of Laboratory Medicine, University of Washington, Seattle, Washington.
Angela JacobsonDepartment of Laboratory Medicine, University of Washington, Seattle, Washington.
Ted A GooleyFred Hutchinson Cancer Research Center, Clinical Research Division, Seattle, Washington.
Stephen J SalipanteDepartment of Laboratory Medicine, University of Washington, Seattle, Washington.
Sigurdis HaraldsdottirDivision of Medical Oncology, Department of Medicine, Stanford University, Stanford, California.
Christina SmithDepartment of Laboratory Medicine, University of Washington, Seattle, Washington.
Sheena ScrogginsDepartment of Laboratory Medicine, University of Washington, Seattle, Washington.
Jonathan F TaitDepartment of Laboratory Medicine, University of Washington, Seattle, Washington.
William M GradyFred Hutchinson Cancer Research Center, Clinical Research Division, Seattle, Washington; Division of Gastroenterology, University of Washington, Seattle, Washington.
Edward H LinDepartment of Medicine, Division of Medical Oncology, University of Washington, Seattle, Washington; Fred Hutchinson Cancer Research Center, Clinical Research Division, Seattle, Washington.
David E CohnDivision of Gynecologic Oncology, The Ohio State University, Columbus, Ohio.
Paul J GoodfellowDivision of Gynecologic Oncology, The Ohio State University, Columbus, Ohio.
Mark W ArnoldDepartment of Surgery, The Ohio State University College of Medicine, Columbus, Ohio.
Albert de la ChapelleDepartment of Molecular Virology, Immunology, and Medical Genetics, The Ohio State University, Columbus, Ohio.
Rachel PearlmanDivision of Human Genetics, Comprehensive Cancer Center, The Ohio State University, Columbus, Ohio.
Heather HampelDivision of Human Genetics, Comprehensive Cancer Center, The Ohio State University, Columbus, Ohio.
Colin C PritchardDepartment of Laboratory Medicine, University of Washington, Seattle, Washington. Electronic address: cpritch@uw.edu.
University of Washington · USThe Ohio State University · USUniversity of Washington Medical Center · USFred Hutch Cancer Center · USStanford University · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Jennifer A. Woyach · 1985 to 2026
$132.3M
TRAINING IN CANCER BIOLOGY &TRANSPLANTATIONT32CA009515 · NCI · UNIVERSITY OF WASHINGTON · PI NANCY ELLEN DAVIDSON, Effie W Petersdorf · 1985 to 2026
$16.2M
INCIDENCE AND MOLECULAR SCREENING FOR HEREDITARY CANCERR01CA067941 · NCI · OHIO STATE UNIVERSITY · PI DE LA CHAPELLE, ALBERT · 2000 to 2004
$2.9M
NATURAL HISTORY AND INCIDENCE OF HEREDITARY COLON CANCERU01CA067941 · NCI · UNIVERSITY OF HELSINKI · PI DE LA CHAPELLE, ALBERT · 1996 to 1999
–
NCI NIH HHS P30 CA015704NCI NIH HHS P30 CA016058NCI NIH HHS R01 CA067941NCI NIH HHS T32 CA009515NCI NIH HHS U01 CA067941
6 · The paper itself

Abstract

BACKGROUND &

aimsSome colorectal and endometrial tumors with microsatellite instability not attributable to MLH1 hypermethylation or germline mutations contain 2 or more somatic mutations in genes encoding mismatch repair (MMR) proteins. We sought to define the molecular phenotype of this newly recognized tumor subtype.

methodsFrom 2 prospective studies of the efficacy of screening for Lynch syndrome, we identified patients with colorectal and endometrial tumors who had 2 or more somatic (but not germline) mutations in genes encoding MMR proteins (double somatic). We determined the frequencies of tumor mutations in PIK3CA, BRAF, KRAS, NRAS, and PTEN by targeted next-generation sequencing and used logistic-regression models to compare them with those from patients with Lynch syndrome, MLH1-hypermethylated, or microsatellite-stable tumors. We validated our findings using independent data sets from The Cancer Genome Atlas.

resultsAmong colorectal cancer cases, we found that 14 of 21 (67%) patients with double somatic tumors also had PIK3CA mutations, compared with 4 of 18 (22%) tumors from patients with Lynch syndrome, 2 of 10 (20%) tumors with MLH1 hypermethylation, and 12 of 78 (15%) tumors with microsatellite stability (P < .0001 for patients with double somatic tumors vs other subgroups). Mutations in PIK3CA were detected in all 13 patients with double somatic endometrial cancers (P = .04 compared with other subgroups). We did not detect BRAF mutations in patients with double somatic colorectal tumors or Lynch syndrome. We found highly similar results in a validation cohort from The Cancer Genome Atlas (113 patients with colorectal tumors, 178 endometrial tumors); 100% of double somatic cases had a somatic mutation in PIK3CA (P < .0001 compared with other subgroups).

conclusionsMost patients with colorectal or endometrial tumors with 2 or more somatic (but not germline) mutations in MMR proteins also have mutations in PIK3CA; mutations in PIK3CA are detected at substantially higher frequencies in these double somatic tumors than in other microsatellite-instability subgroups. PIK3CA mutation status might be used to identify a specific group of colorectal tumors, and to select treatment or determine prognosis.

Indexed as

MutationClass I Phosphatidylinositol 3-KinasesColorectal NeoplasmsColorectal Neoplasms, Hereditary NonpolyposisDNA Mismatch RepairDNA Mutational AnalysisEndometrial NeoplasmsFemaleGTP PhosphohydrolasesHumansMaleMembrane ProteinsMicrosatellite InstabilityPhenotypePhosphatidylinositol 3-KinasesProspective StudiesBRAF protein, humanClass I Phosphatidylinositol 3-KinasesGTP PhosphohydrolasesKRAS protein, humanMembrane ProteinsNRAS protein, humanPhosphatidylinositol 3-KinasesPIK3CA protein, humanProto-Oncogene Proteins B-rafProto-Oncogene Proteins p21(ras)PTEN PhosphohydrolasePTEN protein, humanLynch-Like SyndromeMMRMSIPI3K

Identifiers

PMID27302833
PMCPMC5016834
OpenAlexW2409025966

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.