Evidence map›Paper›PMID 27302652›Full record

ArticleScientific reports2016

Specific impacts of beech and Norway spruce on the structure and diversity of the rhizosphere and soil microbial communities.

S Uroz, P Oger, E Tisserand, A Cébron, M-P Turpault, M Buée, W De Boer, J H J Leveau, P Frey-Klett

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

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  14. Colonization Ability ofMicroorganisms · 2023
    Article
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  20. Bacteria Community InhabitingFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

S UrozINRA-Université de Lorraine , UMR1136 « Interactions Arbres-Microorganismes », F-54280 Champenoux, France.
P OgerUMR5276 Laboratoire de Géologie de Lyon, Ecole Normale de Lyon, 46 allée d'Italie, 69364 Lyon Cedex 07, France.
E TisserandINRA-Université de Lorraine , UMR1136 « Interactions Arbres-Microorganismes », F-54280 Champenoux, France.
A CébronCNRS, LIEC UMR7360 Faculté des Sciences et Technologies, 54506 Vandoeuvre-les-Nancy, France.
M-P TurpaultINRA UR 1138 "Biogéochimie des Ecosystèmes Forestiers", Centre INRA de Nancy, Champenoux, France.
M BuéeINRA-Université de Lorraine , UMR1136 « Interactions Arbres-Microorganismes », F-54280 Champenoux, France.
W De BoerNetherlands Institute of Ecology (NIOO-KNAW), Department of Microbial Ecology, Wageningen, The Netherlands.
J H J LeveauDepartment of Plant Pathology, University of California, Davis CA 95616, USA.
P Frey-KlettINRA-Université de Lorraine , UMR1136 « Interactions Arbres-Microorganismes », F-54280 Champenoux, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The impacts of plant species on the microbial communities and physico-chemical characteristics of soil are well documented for many herbs, grasses and legumes but much less so for tree species. Here, we investigate by rRNA and ITS amplicon sequencing the diversity of microorganisms from the three domains of life (Archaea, Bacteria and Eukaryota:Fungi) in soil samples taken from the forest experimental site of Breuil-Chenue (France). We discovered significant differences in the abundance, composition and structure of the microbial communities associated with two phylogenetically distant tree species of the same age, deciduous European beech (Fagus sylvatica) and coniferous Norway spruce (Picea abies Karst), planted in the same soil. Our results suggest a significant effect of tree species on soil microbiota though in different ways for each of the three microbial groups. Fungal and archaeal community structures and compositions are mainly determined according to tree species, whereas bacterial communities differ to a great degree between rhizosphere and bulk soils, regardless of the tree species. These results were confirmed by quantitative PCR, which revealed significant enrichment of specific bacterial genera, such as Burkholderia and Collimonas, known for their ability to weather minerals within the tree root vicinity.

Indexed as

BiodiversityRhizosphereSoil MicrobiologyArchaeaBacteriaFagusFungiPhylogenyPiceaReal-Time Polymerase Chain ReactionSequence Analysis, DNASoilTemperatureSoil

Identifiers

PMID27302652
PMCPMC4908602

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.