Evidence map›Paper›PMID 27302369›Full record

ArticleNature communications2016

A multigene mutation classification of 468 colorectal cancers reveals a prognostic role for APC.

Michael J Schell, Mingli Yang, Jamie K Teer, Fang Yin Lo, Anup Madan, Domenico Coppola, Alvaro N A Monteiro, Michael V Nebozhyn, Binglin Yue, Andrey Loboda and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 131 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
131citing papers in PubMed, 4 pooled it
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

131 citing papers in PubMed, 4 syntheses or guidelines pooled it, 212 citations in OpenAlex.

  1. Pooled it
  2. Association ofGenetics research · 2022
    Pooled it
  3. Pooled it
  4. Pooled it
  5. Trial
  6. Trial
  7. Trial
  8. The AUTACE That Degrades KRAS and Engages CD8Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  9. Integrative genomic analysis identifies clinically relevant prognostic markers for colorectal cancer patients with liver metastasis.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Article
  10. Oral immunization withJournal for immunotherapy of cancer · 2026
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

71 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Michael J SchellDepartment of Biostatistics and Bioinformatics, Moffitt Cancer Center and Research Institute, 12902 Magnolia Drive, Tampa, Florida 33612, USA.
Mingli YangGibbs Cancer Center and Research Institute, 380 Serpentine Drive, Spartanburg, South Carolina 29303, USA.
Jamie K TeerDepartment of Biostatistics and Bioinformatics, Moffitt Cancer Center and Research Institute, 12902 Magnolia Drive, Tampa, Florida 33612, USA.
Fang Yin LoGenomic Services, LabCorp Clinical Trials, 401 Terry Avenue North, Suite 200, Seattle, Washington 98109, USA.
Anup MadanGenomic Services, LabCorp Clinical Trials, 401 Terry Avenue North, Suite 200, Seattle, Washington 98109, USA.
Domenico CoppolaDepartment of Anatomic Pathology, Moffitt Cancer Center and Research Institute, 12902 Magnolia Drive, Tampa, Florida 33612, USA.
Alvaro N A MonteiroDepartment of Epidemiology, Moffitt Cancer Center and Research Institute, 12902 Magnolia Drive, Tampa, Florida 33612, USA.
Michael V NebozhynGenetics and Pharmacogenomics, Merck, Sharp and Dohme, PO Box 4, 770 Sumneytown Pike, Building 53, West Point, Pennsylvania 19486, USA.
Binglin YueDepartment of Biostatistics and Bioinformatics, Moffitt Cancer Center and Research Institute, 12902 Magnolia Drive, Tampa, Florida 33612, USA.
Andrey LobodaGenetics and Pharmacogenomics, Merck, Sharp and Dohme, PO Box 4, 770 Sumneytown Pike, Building 53, West Point, Pennsylvania 19486, USA.
Gabriel A Bien-WillnerMolecular Health, 2700 Technology Forest Boulevard, The Woodlands, Texas 77381, USA.
Danielle M GreenawaltGenetics and Pharmacogenomics, Merck, Sharp and Dohme, PO Box 4, 770 Sumneytown Pike, Building 53, West Point, Pennsylvania 19486, USA.
Timothy J YeatmanGibbs Cancer Center and Research Institute, 380 Serpentine Drive, Spartanburg, South Carolina 29303, USA.
Moffitt Cancer Center · USLabCorp (United States) · USSpartanburg Regional Healthcare System · USUnited States Military Academy · USMerck & Co., Inc., Rahway, NJ, USA (United States) · USOpexa Therapeutics (United States) · US

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI KENNETH Lynn WRIGHT · 1998 to 2026
$93.5M
INDIVIDUALIZING COLON CANCER THERAPY USING HYBRID RNA AND DNA MOLECULAR SIGNATUREU01CA157960 · NCI · SPARTANBURG REGIONAL MEDICAL CENTER · PI YEATMAN, TIMOTHY J · 2012 to 2016
$2.8M
NCI NIH HHS P30 CA076292NCI NIH HHS U01 CA157960
6 · The paper itself

Abstract

Colorectal cancer (CRC) is a highly heterogeneous disease, for which prognosis has been relegated to clinicopathologic staging for decades. There is a need to stratify subpopulations of CRC on a molecular basis to better predict outcome and assign therapies. Here we report targeted exome-sequencing of 1,321 cancer-related genes on 468 tumour specimens, which identified a subset of 17 genes that best classify CRC, with APC playing a central role in predicting overall survival. APC may assume 0, 1 or 2 truncating mutations, each with a striking differential impact on survival. Tumours lacking any APC mutation carry a worse prognosis than single APC mutation tumours; however, two APC mutation tumours with mutant KRAS and TP53 confer the poorest survival among all the subgroups examined. Our study demonstrates a prognostic role for APC and suggests that sequencing of APC may have clinical utility in the routine staging and potential therapeutic assignment for CRC.

Indexed as

Adenomatous Polyposis Coli Proteinbeta CateninCell NucleusColorectal NeoplasmsGenes, NeoplasmHumansKaplan-Meier EstimateMicrosatellite InstabilityMutationMutation RateNeoplasm MetastasisPrognosisProportional Hazards ModelsStaining and LabelingStatistics, NonparametricWnt ProteinsAdenomatous Polyposis Coli ProteinAPC protein, humanbeta CateninWnt Proteins

Identifiers

PMID27302369
PMCPMC4912618
OpenAlexW2421455087

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.