Evidence map›Paper›PMID 27302066›Full record

ArticleThe Journal of biological chemistry2016

CerS6 Is a Novel Transcriptional Target of p53 Protein Activated by Non-genotoxic Stress.

Baharan Fekry, Kristen A Jeffries, Amin Esmaeilniakooshkghazi, Besim Ogretmen, Sergey A Krupenko, Natalia I Krupenko

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 57 citations in OpenAlex.

  1. Determinants of CBiomolecules · 2026
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  20. Sphingolipids and the link between alcohol and cancer.Chemico-biological interactions · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Baharan FekryFrom the Nutrition Research Institute, University of North Carolina at Chapel Hill, Kannapolis, North Carolina 28081.
Kristen A JeffriesFrom the Nutrition Research Institute, University of North Carolina at Chapel Hill, Kannapolis, North Carolina 28081.
Amin EsmaeilniakooshkghaziFrom the Nutrition Research Institute, University of North Carolina at Chapel Hill, Kannapolis, North Carolina 28081.
Besim Ogretmenthe Department of Biochemistry and Hollings Cancer Center, Medical University of South Carolina, Charleston, South Carolina 29425, and.
Sergey A KrupenkoFrom the Nutrition Research Institute, University of North Carolina at Chapel Hill, Kannapolis, North Carolina 28081, the Department of Nutrition, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599.
Natalia I KrupenkoFrom the Nutrition Research Institute, University of North Carolina at Chapel Hill, Kannapolis, North Carolina 28081, the Department of Nutrition, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599 Natalia_krupenko@unc.edu.
University of North Carolina at Chapel Hill · USMedical University of South Carolina · US

Funding

Ceramide Signaling in the Regulation of Head & Neck Cancer Cell Death and TherapyR01DE016572 · NIDCR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI OGRETMEN, BESIM · 2005 to 2025
$7.4M
Ceramide signaling in the regulation of cellular response to folate stressR01CA193782 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KRUPENKO, NATALIA IVANOVNA · 2015 to 2019
$1.7M
NCI NIH HHS R01 CA193782NIDCR NIH HHS R01 DE016572
6 · The paper itself

Abstract

Our previous study suggested that ceramide synthase 6 (CerS6), an enzyme in sphingolipid biosynthesis, is regulated by p53: CerS6 was elevated in several cell lines in response to transient expression of p53 or in response to folate stress, which is known to activate p53. It was not clear, however, whether CerS6 gene is a direct transcriptional target of p53 or whether this was an indirect effect through additional regulatory factors. In the present study, we have shown that the CerS6 promoter is activated by p53 in luciferase assays, whereas transcriptionally inactive R175H p53 mutant failed to induce the luciferase expression from this promoter. In vitro immunoprecipitation assays and gel shift analyses have further demonstrated that purified p53 binds within the CerS6 promoter sequence spanning 91 bp upstream and 60 bp downstream of the transcription start site. The Promo 3.0.2 online tool for the prediction of transcription factor binding sites indicated the presence of numerous putative non-canonical p53 binding motifs in the CerS6 promoter. Luciferase assays and gel shift analysis have identified a single motif upstream of the transcription start as a key p53 response element. Treatment of cells with Nutlin-3 or low concentrations of actinomycin D resulted in a strong elevation of CerS6 mRNA and protein, thus demonstrating that CerS6 is a component of the non-genotoxic p53-dependent cellular stress response. This study has shown that by direct transcriptional activation of CerS6, p53 can regulate specific ceramide biosynthesis, which contributes to the pro-apoptotic cellular response.

Indexed as

Mutation, MissenseNucleotide MotifsResponse ElementsStress, PhysiologicalTranscription, GeneticA549 CellsAmino Acid SubstitutionCeramidesHumansImidazolesMembrane ProteinsPiperazinesSphingosine N-AcyltransferaseTumor Suppressor Protein p53CeramidesCERS6 protein, humanImidazolesMembrane Proteinsnutlin 3PiperazinesSphingosine N-AcyltransferaseTP53 protein, humanTumor Suppressor Protein p53ceramide synthaselipid signalingp53transcription factortranscription regulation

Identifiers

PMID27302066
PMCPMC4974374
OpenAlexW2442260070

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.