Evidence map›Paper›PMID 27301662›Full record

ReviewThe Journal of antibiotics2016

Recent advances of Diels-Alderases involved in natural product biosynthesis.

Atsushi Minami, Hideaki Oikawa

Abstract readReview
PubMed Publisher
In one paragraph

Review in The Journal of antibiotics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Advances on the biosynthesis of pyridine rings.Engineering microbiology · 2023
    Review
  5. EnzymaticJournal of the American Chemical Society · 2023
    Article
  6. Article
  7. Article
  8. Catalysis and Electron Transfer inChemical reviews · 2022
    Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Total synthesis of nahuoic acid AChemical science · 2021
    Article
  15. Article
  16. Review
  17. Review
  18. Catalytic mechanism andNature catalysis · 2021
    Article
  19. Article
  20. Computational Investigation of the Mechanism of Diels-Alderase PyrI4.Journal of the American Chemical Society · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Atsushi MinamiDepartment of Chemistry, Graduate School of Science, Hokkaido University, Sapporo, Japan.
Hideaki OikawaDepartment of Chemistry, Graduate School of Science, Hokkaido University, Sapporo, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Frequent occurrence of [4+2] adducts in the secondary metabolites suggested involvement of Diels-Alderases (DAases) in their biosynthesis. However, a limited number of DAases were reported before early 2000s. Advancements in whole-genome sequencing and searching tool of the biosynthetic gene clusters of the secondary metabolites facilitate the identification of plausible DAases. Thus, during past 5 years, nine DAases have been characterized by genetic and biochemical analyses. These include a detailed functional analysis of SpnF that solely catalyzes [4+2] cycloaddition, a structural analysis of spirotetramate-forming enzyme PyrI4 complexed with the corresponding cycloadduct, and DAases catalyzing decalin formation and macrocyclic pyridine formation. Together with decalin-forming enzymes and macrocyclic pyridine-forming enzymes, these results provided sufficient data to discuss catalytic mechanism of DAases and nature's strategy for molecular diversification of linear chain intermediates derived from polyketide and ribosomal peptide biosynthetic machinery.

Indexed as

Cycloaddition ReactionBiological ProductsIntramolecular OxidoreductasesMultienzyme ComplexesNaphthalenesPolyketide SynthasesBiological ProductsdecalinIntramolecular Oxidoreductasesmacrophomate synthaseMultienzyme ComplexesNaphthalenesPolyketide Synthasessolanapyrone synthase

Identifiers

PMID27301662

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.