Evidence map›Paper›PMID 27300555›Full record

ArticleChromosoma2017

Transvection in Drosophila: trans-interaction between yellow enhancers and promoter is strongly suppressed by a cis-promoter only in certain genomic regions.

Oksana Kravchuk, Maria Kim, Pavel Klepikov, Alexander Parshikov, Pavel Georgiev, Mikhail Savitsky

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Article in Chromosoma, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Oksana KravchukKoltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia, 119334.
Maria KimDepartment of Molecular Biology, Umea University, 90187, Umea, Sweden.
Pavel KlepikovMoscow State University, Moscow, Russia.
Alexander ParshikovDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia, 119334.
Pavel GeorgievDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia, 119334. georgiev_p@mail.ru.ORCID 0000-0002-6509-3194
Mikhail SavitskyKoltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia, 119334. msavitsky@gmail.com.
Institute of Gene Biology · RUKoltzov Institute of Developmental Biology · RULomonosov Moscow State University · RUUmeå University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transvection is a phenomenon of interallelic communication whereby enhancers of one allele can activate a promoter located on the homologous chromosome. It has been shown for many independent genes that enhancers preferentially act on the cis-linked promoter, but deletion of this promoter allows the enhancers to act in trans. Here, we tested whether this cis-preference in the enhancer-promoter interaction could be reconstituted outside of the natural position of a gene. The yellow gene was chosen as a model system. Transgenic flies were generated that carried the yellow gene modified by the inclusion of the strategically placed recognition sites for the Cre and Flp recombinases. To facilitate transvection, an endogenous Su(Hw) insulator (1A2) or gypsy insulator was placed behind the yellow gene. Independent action of the recombinases produced a pair of derivative alleles, one containing the promoter-driven yellow gene, and the other, the enhancers and promoter that failed to produce a functional yellow protein. As a result, we observed strong transvection in many genomic regions, suggesting that a complete cis-preference of the enhancer-promoter interactions is mainly restricted to genes in their natural loci.

Indexed as

Enhancer Elements, GeneticPromoter Regions, GeneticTranscriptional ActivationAllelesAnimalsChromosomes, InsectDrosophila melanogasterDrosophila ProteinsGene Expression RegulationDrosophila ProteinsChromatin insulatorsChromosome pairingEnhancer–promoter communicationSu(Hw)Transcriptional regulation

Identifiers

PMID27300555
OpenAlexW2440490470

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.