Evidence map›Paper›PMID 27300438›Full record

ArticleCancer cell2016

DNMT3A Loss Drives Enhancer Hypomethylation in FLT3-ITD-Associated Leukemias.

Liubin Yang, Benjamin Rodriguez, Allison Mayle, Hyun Jung Park, Xueqiu Lin, Min Luo, Mira Jeong, Choladda V Curry, Sang-Bae Kim, David Ruau and 10 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Cancer cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 177 citations in OpenAlex.

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  15. Erythropoiesis: insights from a genomic perspective.Experimental & molecular medicine · 2024
    Review
  16. Article
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  18. Article
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  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 3 countries.

Liubin Yang *Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA.
Benjamin Rodriguez *Dan L. Duncan Cancer Center and Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas 77030, USA.
Allison Mayle *Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA.
Hyun Jung ParkDan L. Duncan Cancer Center and Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas 77030, USA.
Xueqiu LinDan L. Duncan Cancer Center and Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas 77030, USA.
Min LuoStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, Texas 77030, USA.
Mira JeongStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, Texas 77030, USA.
Choladda V CurryDepartment of Pathology and Immunology, Texas Children's Hospital, Baylor College of Medicine, Houston, Texas 77030, USA.
Sang-Bae KimDepartment of Systems Biology, Division of Cancer Medicine, University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA.
David RuauWellcome Trust/MRC Stem Cell Institute, Cambridge CB2 0XY, UK.
Xiaotian ZhangDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA.
Ting ZhouGreehey Children's Cancer Research Institute and Department of Cellular and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA.
Michael ZhouRice University, Houston, Texas 77030, USA.
Vivienne I RebelGreehey Children's Cancer Research Institute and Department of Cellular and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA.
Grant A ChallenDivision of Oncology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Berthold GottgensWellcome Trust/MRC Stem Cell Institute, Cambridge CB2 0XY, UK.
Ju-Seog LeeDepartment of Systems Biology, Division of Cancer Medicine, University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA.
Rachel RauDepartment of Pediatrics, Baylor College of Medicine, Houston, Texas 77030, USA.
Wei LiDan L. Duncan Cancer Center and Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas 77030, USA.
Margaret A GoodellDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA.
Baylor College of Medicine · USThe University of Texas Health Science Center at San Antonio · USThe University of Texas MD Anderson Cancer Center · USWellcome/MRC Cambridge Stem Cell Institute · GBRice University · USTongji University · CNWashington University in St. Louis · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Tissue ResourceP50CA126752 · NCI · BAYLOR COLLEGE OF MEDICINE · PI MALCOLM K. BRENNER, HELEN E HESLOP · 2007 to 2026
$51.4M
Virology CoreP30AI036211 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI KOZINETZ, CLAUDIA A. · 1994 to 2015
$21.7M
PEDIATRIC ONCOLOGY CLINICAL RESEARCH TRAINING PROGRAMK12CA090433 · NCI · BAYLOR COLLEGE OF MEDICINE · PI CARL E ALLEN, Donald W. Parsons · 2002 to 2026
$18.5M
Hematology Training ProgramT32DK060445 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI GOODELL, MARGARET A. · 2002 to 2023
$8.3M
REGULATION OF HEMATOPOIETIC PROGENITORS BY DE NOVO DNA METHYLATIONR01DK092883 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI GOODELL, MARGARET A. · 2012 to 2024
$7.4M
DNMT3A in Development of Hematologic MalignanciesR01CA183252 · NCI · BAYLOR COLLEGE OF MEDICINE · PI MARGARET A. GOODELL · 2014 to 2026
$7.1M
Computational and Experimental Modeling of Alternative PolyadenylationR01CA193466 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI LI, WEI · 2016 to 2025
$3.3M
Computational and Experimental Modeling of Epigenetic DNA MethylationR01HG007538 · NHGRI · UNIVERSITY OF CALIFORNIA-IRVINE · PI LI, WEI · 2014 to 2018
$1.9M
BD Biosciences Special Order LSRIIS10RR024574 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI LUMPKIN, ELLEN A · 2009 to 2009
$430k
Regulation of Hematopoietic Progenitors by de novo DNA MethylationR56DK092883 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI GOODELL, MARGARET A. · 2011 to 2011
$344k
Cancer Research UK 12765Medical Research Council MC_PC_12009NCI NIH HHS K12 CA090433NCI NIH HHS P30 CA125123NCI NIH HHS P50 CA126752NCI NIH HHS R01 CA183252NCI NIH HHS R01 CA193466NCRR NIH HHS S10 RR024574NHGRI NIH HHS R01 HG007538NIAID NIH HHS P30 AI036211NIDDK NIH HHS R01 DK092883NIDDK NIH HHS R56 DK092883NIDDK NIH HHS T32 DK060445
6 · The paper itself

Abstract

DNMT3A, the gene encoding the de novo DNA methyltransferase 3A, is among the most frequently mutated genes in hematologic malignancies. However, the mechanisms through which DNMT3A normally suppresses malignancy development are unknown. Here, we show that DNMT3A loss synergizes with the FLT3 internal tandem duplication in a dose-influenced fashion to generate rapid lethal lymphoid or myeloid leukemias similar to their human counterparts. Loss of DNMT3A leads to reduced DNA methylation, predominantly at hematopoietic enhancer regions in both mouse and human samples. Myeloid and lymphoid diseases arise from transformed murine hematopoietic stem cells. Broadly, our findings support a role for DNMT3A as a guardian of the epigenetic state at enhancer regions, critical for inhibition of leukemic transformation.

Indexed as

DNA MethylationAnimalsDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3AEnhancer Elements, GeneticEpigenesis, Geneticfms-Like Tyrosine Kinase 3Gene Expression Regulation, NeoplasticGene Knockout TechniquesHumansLeukemiaMiceMutationNeoplasms, ExperimentalDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADNMT3A protein, humanDnmt3a protein, mouseFLT3 protein, humanfms-Like Tyrosine Kinase 3

Identifiers

PMID27300438
PMCPMC4908977
OpenAlexW2337256135

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.