Evidence map›Paper›PMID 27298321›Full record

ArticleThe Journal of biological chemistry2016

A WHEP Domain Regulates the Dynamic Structure and Activity of Caenorhabditis elegans Glycyl-tRNA Synthetase.

Chih-Yao Chang, Chin-I Chien, Chia-Pei Chang, Bo-Chun Lin, Chien-Chia Wang

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Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Adaptive evolution: Eukaryotic enzyme's specificity shift to a bacterial substrate.Protein science : a publication of the Protein Society · 2024
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  11. Two crystal structures reveal design for repurposing the C-Ala domain of human AlaRS.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Chih-Yao ChangFrom the Department of Life Sciences, National Central University, Taoyuan 32001, Taiwan.ORCID 0000-0002-6688-1520
Chin-I ChienFrom the Department of Life Sciences, National Central University, Taoyuan 32001, Taiwan.ORCID 0000-0002-6073-2532
Chia-Pei ChangFrom the Department of Life Sciences, National Central University, Taoyuan 32001, Taiwan.ORCID 0000-0002-1412-9652
Bo-Chun LinFrom the Department of Life Sciences, National Central University, Taoyuan 32001, Taiwan.
Chien-Chia WangFrom the Department of Life Sciences, National Central University, Taoyuan 32001, Taiwan dukewang@cc.ncu.edu.tw.ORCID 0000-0002-7104-1307
National Central University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

WHEP domains exist in certain eukaryotic aminoacyl-tRNA synthetases and play roles in tRNA or protein binding. We present evidence herein that cytoplasmic and mitochondrial forms of Caenorhabditis elegans glycyl-tRNA synthetase (CeGlyRS) are encoded by the same gene (CeGRS1) through alternative initiation of translation. The cytoplasmic form possessed an N-terminal WHEP domain, whereas its mitochondrial isoform possessed an extra N-terminal sequence consisting of an mitochondrial targeting signal and an appended domain. Cross-species complementation assays showed that CeGRS1 effectively rescued the cytoplasmic and mitochondrial defects of a yeast GRS1 knock-out strain. Although both forms of CeGlyRS efficiently charged the cytoplasmic tRNAs(Gly) of C. elegans, the mitochondrial form was much more efficient than its cytoplasmic counterpart in charging the mitochondrial tRNA(Gly) isoacceptor, which carries a defective TψC hairpin. Despite the WHEP domain per se lacking tRNA binding activity, deletion of this domain reduced the catalytic efficiency of the enzyme. Most interestingly, the deletion mutant possessed a higher thermal stability and a somewhat lower structural flexibility. Our study suggests a role for the WHEP domain as a regulator of the dynamic structure and activity of the enzyme.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsGlycine-tRNA LigaseMitochondrial ProteinsProtein DomainsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCaenorhabditis elegans ProteinsGlycine-tRNA LigaseGRS1 protein, S cerevisiaeMitochondrial ProteinsSaccharomyces cerevisiae Proteinsaminoacyl tRNA synthetaseCaenorhabditis elegans (C. elegans)neurodegenerative diseaseneurological diseaseprotein domainprotein synthesis

Identifiers

PMID27298321
PMCPMC4974372
OpenAlexW2435147064

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.