Evidence map›Paper›PMID 27298259›Full record

ArticleNucleic acids research2016

Functional interplay between SA1 and TRF1 in telomeric DNA binding and DNA-DNA pairing.

Jiangguo Lin, Preston Countryman, Haijiang Chen, Hai Pan, Yanlin Fan, Yunyun Jiang, Parminder Kaur, Wang Miao, Gisele Gurgel, Changjiang You and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  15. Article
  16. Studying protein-DNA interactions using atomic force microscopy.Seminars in cell & developmental biology · 2018
    Review
  17. Loss of Tumor SuppressorCancer research · 2017
    Article
  18. Review
  19. Single-Molecule Studies of Telomeres and Telomerase.Annual review of biophysics · 2017
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 9 institutions in 4 countries.

Jiangguo LinSchool of Bioscience and Engineering, South China University of Technology, Guangzhou, Guangdong 510006, P.R. China Physics Department, North Carolina State University, Raleigh, North Carolina, NC 27695, USA.
Preston CountrymanPhysics Department, North Carolina State University, Raleigh, North Carolina, NC 27695, USA.
Haijiang ChenDepartment of BioSciences, Rice University, Houston, TX 77005, USA Institute of Microbiology and College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang 310058, P.R. China.
Hai PanPhysics Department, North Carolina State University, Raleigh, North Carolina, NC 27695, USA.
Yanlin FanDepartment of BioSciences, Rice University, Houston, TX 77005, USA.
Yunyun JiangDepartment of BioSciences, Rice University, Houston, TX 77005, USA.
Parminder KaurPhysics Department, North Carolina State University, Raleigh, North Carolina, NC 27695, USA.
Wang MiaoDepartment of Neurology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450014, P.R. China.
Gisele GurgelBiomanufacturing Training and Education Center, North Carolina State University, Raleigh, North Carolina, NC 27695, USA.
Changjiang YouDivision of Biophysics, Universität Osnabrück, Barbarstrasse 11, 49076 Osnabrück, Germany.
Jacob PiehlerDivision of Biophysics, Universität Osnabrück, Barbarstrasse 11, 49076 Osnabrück, Germany.
Neil M KadSchool of Biosciences, University of Kent, Canterbury, Kent CT2 7NJ, UK.
Robert RiehnPhysics Department, North Carolina State University, Raleigh, North Carolina, NC 27695, USA.
Patricia L OpreskoDepartment of Environmental and Occupational Health, University of Pittsburgh, PA 15213, USA.
Susan SmithKimmel Center for Biology and Medicine at the Skirball Institute, Department of Pathology, New York University School of Medicine, New York, NY 10016, USA.
Yizhi Jane TaoDepartment of BioSciences, Rice University, Houston, TX 77005, USA.
Hong WangPhysics Department, North Carolina State University, Raleigh, North Carolina, NC 27695, USA hong_wang@ncsu.edu.
North Carolina State University · USRice University · USOsnabrück University · DEFirst Affiliated Hospital of Zhengzhou University · CNNew York University · USSouth China University of Technology · CNUniversity of Kent · GBUniversity of Pittsburgh · USZhejiang University · CN

Funding

Translational Research Support CoreP30ES025128 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI Andrew R. Binder · 2015 to 2026
$18.3M
Mechanisms of Sister Telomere Cohesion and ResolutionR01CA116352 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SMITH, SUSAN · 2007 to 2016
$3.1M
Mechanisms of Telomere Resistance to DNA Lesion RemovalR01ES022944 · NIEHS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI OPRESKO, PATRICIA L · 2013 to 2017
$1.6M
Mechanism of protein-mediated looping in a complex environmentR01GM107559 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI RIEHN, ROBERT, WANG, HONG · 2014 to 2017
$1.3M
DNA damage induced structural and dynamic changes at telomeresR00ES016758 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI WANG, HONG · 2012 to 2014
$733k
NCI NIH HHS R01 CA116352NIEHS NIH HHS P30 ES025128NIEHS NIH HHS R00 ES016758NIEHS NIH HHS R01 ES022944NIGMS NIH HHS R01 GM107559
6 · The paper itself

Abstract

Proper chromosome alignment and segregation during mitosis depend on cohesion between sister chromatids. Cohesion is thought to occur through the entrapment of DNA within the tripartite ring (Smc1, Smc3 and Rad21) with enforcement from a fourth subunit (SA1/SA2). Surprisingly, cohesin rings do not play a major role in sister telomere cohesion. Instead, this role is replaced by SA1 and telomere binding proteins (TRF1 and TIN2). Neither the DNA binding property of SA1 nor this unique telomere cohesion mechanism is understood. Here, using single-molecule fluorescence imaging, we discover that SA1 displays two-state binding on DNA: searching by one-dimensional (1D) free diffusion versus recognition through subdiffusive sliding at telomeric regions. The AT-hook motif in SA1 plays dual roles in modulating non-specific DNA binding and subdiffusive dynamics over telomeric regions. TRF1 tethers SA1 within telomeric regions that SA1 transiently interacts with. SA1 and TRF1 together form longer DNA-DNA pairing tracts than with TRF1 alone, as revealed by atomic force microscopy imaging. These results suggest that at telomeres cohesion relies on the molecular interplay between TRF1 and SA1 to promote DNA-DNA pairing, while along chromosomal arms the core cohesin assembly might also depend on SA1 1D diffusion on DNA and sequence-specific DNA binding.

Indexed as

AT-Hook MotifsChromatidsChromosome SegregationDNA-Binding ProteinsHumansMicroscopy, Atomic ForceMitosisNuclear ProteinsTelomereTelomere-Binding ProteinsTelomeric Repeat Binding Protein 1DNA-Binding ProteinsNuclear ProteinsSTAG1 protein, humanTelomere-Binding ProteinsTelomeric Repeat Binding Protein 1TINF2 protein, human

Identifiers

PMID27298259
PMCPMC5291270
OpenAlexW2426320252

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.