Evidence map›Paper›PMID 27298254›Full record

ArticleNucleic acids research2016

The Shu complex promotes error-free tolerance of alkylation-induced base excision repair products.

Stephen K Godin, Zhuying Zhang, Benjamin W Herken, James W Westmoreland, Alison G Lee, Michael J Mihalevic, Zhongxun Yu, Robert W Sobol, Michael A Resnick, Kara A Bernstein

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  5. Article
  6. Article
  7. RAD51 paralog function in replicative DNA damage and tolerance.Current opinion in genetics & development · 2021
    Review
  8. Article
  9. Review
  10. Annual review of genetics · 2020
    Review
  11. Genome Profiling for Aflatoxin BG3 (Bethesda, Md.) · 2020
    Article
  12. Review
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  14. Article
  15. Article
  16. Review
  17. Article
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Stephen K GodinUniversity of Pittsburgh School of Medicine, Department of Microbiology and Molecular Genetics, 5117 Centre Avenue, Pittsburgh, PA 15213, USA.
Zhuying ZhangUniversity of Pittsburgh School of Medicine, Department of Microbiology and Molecular Genetics, 5117 Centre Avenue, Pittsburgh, PA 15213, USA Tsinghua University School of Medicine, Tsinghua University, Haidian District, Beijing 100084, China.
Benjamin W HerkenUniversity of Pittsburgh School of Medicine, Department of Microbiology and Molecular Genetics, 5117 Centre Avenue, Pittsburgh, PA 15213, USA.
James W WestmorelandChromosome Stability Group, Laboratory of Molecular Genetics, National Institute of Environmental Health Sciences (NIEHS), National Institutes of Health, Research Triangle Park, NC 27709, USA.
Alison G LeeUniversity of Pittsburgh School of Medicine, Department of Microbiology and Molecular Genetics, 5117 Centre Avenue, Pittsburgh, PA 15213, USA.
Michael J MihalevicUniversity of Pittsburgh School of Medicine, Department of Microbiology and Molecular Genetics, 5117 Centre Avenue, Pittsburgh, PA 15213, USA.
Zhongxun YuTsinghua University School of Medicine, Tsinghua University, Haidian District, Beijing 100084, China Department of Pharmacology & Chemical Biology, Pittsburgh, PA 15217, USA.
Robert W SobolDepartment of Pharmacology & Chemical Biology, Pittsburgh, PA 15217, USA University of South Alabama Mitchell Cancer Institute, 1660 Springhill Avenue, Mobile, AL 36604, USA.ORCID 0000-0001-7385-3563
Michael A ResnickChromosome Stability Group, Laboratory of Molecular Genetics, National Institute of Environmental Health Sciences (NIEHS), National Institutes of Health, Research Triangle Park, NC 27709, USA.
Kara A BernsteinUniversity of Pittsburgh School of Medicine, Department of Microbiology and Molecular Genetics, 5117 Centre Avenue, Pittsburgh, PA 15213, USA karab@pitt.edu.
University of Pittsburgh · USNational Institutes of Health · USUSA Mitchell Cancer Institute · US

Funding

Double Strand Break Repair And RecombinationZIAES021016 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI MENENDEZ RENDON, DANIEL · 2009 to 2018
$5.6M
Novel approaches to enhance tumor cell cytotoxicity of alkylating agentsR01CA148629 · NCI · UNIVERSITY OF SOUTH ALABAMA · PI SOBOL, ROBERT W · 2010 to 2021
$3.4M
MOLECULAR MECHANISMS OF DNA REPAIR AND RECOMBINATION IN YEASTZ01ES065073 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI RESNICK, MICHAEL A · 1991 to 2008
$2.8M
DNA repair deficient cells for analysisR44GM087798 · NIGMS · TREVIGEN, INC. · PI GEORGE, JAY, SOBOL, ROBERT W · 2010 to 2011
$2.5M
Replication fork dynamics and repair by Rad51 paralogues after DNA alkylationR01ES024872 · NIEHS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BERNSTEIN, KARA A · 2015 to 2019
$2.4M
Mechanistic insights into the SHU complex and Sgs1 in DNA repair and replicationK99GM088413 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BERNSTEIN, KARA A · 2009 to 2010
$180k
NCI NIH HHS R01 CA148629NIEHS NIH HHS R01 ES024872NIEHS NIH HHS Z01 ES065073NIGMS NIH HHS K99 GM088413NIGMS NIH HHS R44 GM087798
6 · The paper itself

Abstract

Here, we investigate the role of the budding yeast Shu complex in promoting homologous recombination (HR) upon replication fork damage. We recently found that the Shu complex stimulates Rad51 filament formation during HR through its physical interactions with Rad55-Rad57. Unlike other HR factors, Shu complex mutants are primarily sensitive to replicative stress caused by MMS and not to more direct DNA breaks. Here, we uncover a novel role for the Shu complex in the repair of specific MMS-induced DNA lesions and elucidate the interplay between HR and translesion DNA synthesis. We find that the Shu complex promotes high-fidelity bypass of MMS-induced alkylation damage, such as N3-methyladenine, as well as bypassing the abasic sites generated after Mag1 removes N3-methyladenine lesions. Furthermore, we find that the Shu complex responds to ssDNA breaks generated in cells lacking the abasic site endonucleases. At each lesion, the Shu complex promotes Rad51-dependent HR as the primary repair/tolerance mechanism over error-prone translesion DNA polymerases. Together, our work demonstrates that the Shu complex's promotion of Rad51 pre-synaptic filaments is critical for high-fidelity bypass of multiple replication-blocking lesion.

Indexed as

DNA RepairAdenineAlkylationCamptothecinCisplatinDNA DamageDNA, FungalDNA Polymerase betaEpistasis, GeneticEtoposideGenes, FungalGenetic LociHomologous RecombinationHumansHydrogen PeroxideHydroxyureaAdenineCamptothecinCisplatinDNA, FungalDNA Polymerase betaEtoposideHydrogen PeroxideHydroxyureaMethyl MethanesulfonateN3-methyladenineSaccharomyces cerevisiae Proteins

Identifiers

PMID27298254
PMCPMC5041462
OpenAlexW2419919327

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.