Evidence map›Paper›PMID 27295265›Full record

ArticlePlant cell reports2016

Reduction of GIGANTEA expression in transgenic Brassica rapa enhances salt tolerance.

Jin A Kim, Ha-Eun Jung, Joon Ki Hong, Victor Hermand, C Robertson McClung, Yeon-Hee Lee, Joo Yeol Kim, Soo In Lee, Mi-Jeong Jeong, Jungsun Kim and 2 more

Abstract read
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In one paragraph

Article in Plant cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. The Roles of Circadian Clock Genes in Plant Temperature Stress Responses.International journal of molecular sciences · 2024
    Review
  5. Article
  6. SOS1 safeguards plant circadian rhythm against daily salt fluctuations.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Identification and Characterization ofInternational journal of molecular sciences · 2022
    Article
  8. GIpred: a computational tool for prediction of GIGANTEA proteins using machine learning algorithm.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  9. TheGenes · 2021
    Article
  10. Review
  11. Review
  12. Review
  13. Circadian Rhythms in Plants.Cold Spring Harbor perspectives in biology · 2019
    Review
  14. Article
  15. Review
  16. The Importance of the Circadian Clock in Regulating Plant Metabolism.International journal of molecular sciences · 2017
    Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jin A KimDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, 370, Nongsaengmyeong-ro, Wansan-gu, Jeollabuk-do, Jeonju-si, 560-500, Korea. jakim72@korea.kr.
Ha-Eun JungDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, 370, Nongsaengmyeong-ro, Wansan-gu, Jeollabuk-do, Jeonju-si, 560-500, Korea.
Joon Ki HongDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, 370, Nongsaengmyeong-ro, Wansan-gu, Jeollabuk-do, Jeonju-si, 560-500, Korea.
Victor HermandDepartment of Biological Sciences, Dartmouth College, Hanover, NH, 03755-3563, USA.
C Robertson McClungDepartment of Biological Sciences, Dartmouth College, Hanover, NH, 03755-3563, USA.
Yeon-Hee LeeDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, 370, Nongsaengmyeong-ro, Wansan-gu, Jeollabuk-do, Jeonju-si, 560-500, Korea.
Joo Yeol KimDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, 370, Nongsaengmyeong-ro, Wansan-gu, Jeollabuk-do, Jeonju-si, 560-500, Korea.
Soo In LeeDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, 370, Nongsaengmyeong-ro, Wansan-gu, Jeollabuk-do, Jeonju-si, 560-500, Korea.
Mi-Jeong JeongDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, 370, Nongsaengmyeong-ro, Wansan-gu, Jeollabuk-do, Jeonju-si, 560-500, Korea.
Jungsun KimDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, 370, Nongsaengmyeong-ro, Wansan-gu, Jeollabuk-do, Jeonju-si, 560-500, Korea.
DaeJin YunDivision of Applied Life Science (BK21 Program), Plant Molecular Biology and Biotechnology Research Center, Graduate School of Gyeongsang National University, Jinju, 660-701, South Korea.
WeoYeon KimDivision of Applied Life Science (BK21 Plus), PMBBRC & IALS, Graduate School of Gyeongsang National University, Jinju, 660-701, South Korea. kim1312@gnu.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageHere we report the enhancement of tolerance to salt stress in Brassica rapa (Chinese cabbage) through the RNAi-mediated reduction of GIGANTEA ( GI ) expression. Circadian clocks integrate environmental signals with internal cues to coordinate diverse physiological outputs. The GIGANTEA (GI) gene was first discovered due to its important contribution to photoperiodic flowering and has since been shown to be a critical component of the plant circadian clock and to contribute to multiple environmental stress responses. We show that the GI gene in Brassica rapa (BrGI) is similar to Arabidopsis GI in terms of both expression pattern and function. BrGI functionally rescued the late-flowering phenotype of the Arabidopsis gi-201 loss-of-function mutant. RNAi-mediated suppression of GI expression in Arabidopsis Col-0 and in the Chinese cabbage, B. rapa DH03, increased tolerance to salt stress. Our results demonstrate that the molecular functions of GI described in Arabidopsis are conserved in B. rapa and suggest that manipulation of gene expression through RNAi and transgenic overexpression could enhance tolerance to abiotic stresses and thus improve agricultural crop production.

Indexed as

Gene Expression Regulation, PlantArabidopsisBrassica rapaCircadian ClocksGene Knockdown TechniquesGenes, PlantHydroponicsLightPlant ProteinsPlants, Genetically ModifiedRNA InterferenceSalt ToleranceSodium ChlorideStress, PhysiologicalPlant ProteinsSodium ChlorideBrassica rapaCircadian clocksGIGANTEA (GI)RNAiSalt stress resistanceTissue culture

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.