Evidence map›Paper›PMID 27294792›Full record

ArticleNature immunology2016

Specialized proteasome subunits have an essential role in the thymic selection of CD8(+) T cells.

Eleanor Z Kincaid, Shigeo Murata, Keiji Tanaka, Kenneth L Rock

Abstract read
In one paragraph

Article in Nature immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Review
  9. The thymoproteasome in shaping the CD8Current opinion in immunology · 2023
    Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
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  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Eleanor Z KincaidDepartment of Pathology, University of Massachusetts Medical School, Worcester, Massachusetts, USA.
Shigeo MurataLaboratory of Protein Metabolism, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-3177-3503
Keiji TanakaLaboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science, Tokyo, Japan.
Kenneth L RockDepartment of Pathology, University of Massachusetts Medical School, Worcester, Massachusetts, USA.

Funding

PILOT AND FEASIBILITY PROGRAMP30DK032520 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CZECH, MICHAEL P · 1986 to 2010
$14.6M
Translational Cancer Biology Training ProgramT32CA130807 · NCI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MERCURIO, ARTHUR M · 2008 to 2018
$2.7M
IMMUNOBIOLOGY OF MHC RESTRICTION OF T CELLSR37AI020248 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ROCK, KENNETH L · 1998 to 2008
$2.4M
IMMUNOLOGY OF MHC RESTRICTION OF T CELLSR01AI020248 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ROCK, KENNETH L · 1985 to 2013
$2.0M
Mechanisms of positive and negative thymic selection of CD8 T cellsR01AI110374 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ROCK, KENNETH L · 2015 to 2019
$2.0M
Mechanisms of positive and negative thymic selection of CD8 T cellsR56AI110374 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ROCK, KENNETH L · 2014 to 2014
$279k
NCI NIH HHS T32 CA130807NIAID NIH HHS R01 AI020248NIAID NIH HHS R01 AI110374NIAID NIH HHS R37 AI020248NIAID NIH HHS R56 AI110374NIDDK NIH HHS P30 DK032520
6 · The paper itself

Abstract

The cells that stimulate positive selection express specialized proteasome β-subunits different from those expressed by all other cells, including those involved in negative selection. Mice that lack all four specialized proteasome β-subunits, and therefore express only constitutive proteasomes in all cells, had a profound defect in the generation of CD8(+) T cells. While a defect in positive selection would reflect an inability to generate the appropriate positively selecting peptides, a block at negative selection would point to the potential need to switch peptides between positive selection and negative selection to avoid the two processes' often cancelling each other out. We found that the block in T cell development occurred around the checkpoints of positive selection and, unexpectedly, negative selection as well.

Indexed as

Clonal Selection, Antigen-MediatedAnimalsAntigen PresentationCD8-Positive T-LymphocytesCell DifferentiationCells, CulturedCysteine EndopeptidasesFemaleHistocompatibility Antigens Class IMaleMiceMice, Inbred C57BLMice, KnockoutPeptidesProteasome Endopeptidase ComplexThymus GlandCysteine EndopeptidasesHistocompatibility Antigens Class ILMP-2 proteinLMP7 proteinPeptidesProteasome Endopeptidase ComplexPsmb10 protein, mousePsmb11 protein, mouse

Identifiers

PMID27294792
PMCPMC4955723

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.