Evidence map›Paper›PMID 27293794›Full record

ArticleRoyal Society open science2016

Surfing the vegetal pole in a small population: extracellular vertical transmission of an 'intracellular' deep-sea clam symbiont.

Tetsuro Ikuta, Kanae Igawa, Akihiro Tame, Tsuneyoshi Kuroiwa, Haruko Kuroiwa, Yui Aoki, Yoshihiro Takaki, Yukiko Nagai, Genki Ozawa, Masahiro Yamamoto and 4 more

Abstract read
In one paragraph

Article in Royal Society open science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Symbiont Community Composition inApplied and environmental microbiology · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Tetsuro IkutaDepartment of Marine Biodiversity Research , Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , 2-15 Natsushima, Yokosuka, Kanagawa 237-0061 , Japan.ORCID 0000-0003-3158-2421
Kanae IgawaDepartment of Marine Biodiversity Research, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan; Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology, 4-5-7 Konan, Minato-ku, Tokyo 108-8477, Japan.
Akihiro TameMarine Works Japan, Ltd , 3-54-1 Oppamahigashi, Yokosuka, Kanagawa 237-0063 , Japan.
Tsuneyoshi KuroiwaDepartment of Chemical and Biological Sciences, Japan Women's University, 2-8-1 Mejirodai, Bunkyo-ku, Tokyo 112-8681, Japan; Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Gobancho, Chiyoda-ku, Tokyo 102-0076, Japan.
Haruko KuroiwaDepartment of Chemical and Biological Sciences, Japan Women's University, 2-8-1 Mejirodai, Bunkyo-ku, Tokyo 112-8681, Japan; Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Gobancho, Chiyoda-ku, Tokyo 102-0076, Japan.
Yui AokiDepartment of Marine Biodiversity Research , Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , 2-15 Natsushima, Yokosuka, Kanagawa 237-0061 , Japan.
Yoshihiro TakakiDepartment of Subsurface Geobiological Analysis and Research , Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , 2-15 Natsushima, Yokosuka, Kanagawa 237-0061 , Japan.
Yukiko NagaiDepartment of Marine Biodiversity Research , Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , 2-15 Natsushima, Yokosuka, Kanagawa 237-0061 , Japan.
Genki OzawaDepartment of Marine Biodiversity Research, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan; Department of Marine Biosciences, School of Marine Biosciences, Kitasato University, 1-15-1 Kitasato, Minami-ku, Sagamihara, Kanagawa 252-0373, Japan.
Masahiro YamamotoDepartment of Subsurface Geobiological Analysis and Research , Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , 2-15 Natsushima, Yokosuka, Kanagawa 237-0061 , Japan.
Ryusaku DeguchiDepartment of Biology , Miyagi University of Education , Aoba-ku, Sendai, Miyagi 980-0845 , Japan.
Katsunori FujikuraDepartment of Marine Biodiversity Research , Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , 2-15 Natsushima, Yokosuka, Kanagawa 237-0061 , Japan.
Tadashi MaruyamaResearch and Development Center for Marine Biosciences , Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , 2-15 Natsushima, Yokosuka, Kanagawa 237-0061 , Japan.
Takao YoshidaDepartment of Marine Biodiversity Research, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan; Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology, 4-5-7 Konan, Minato-ku, Tokyo 108-8477, Japan; Department of Marine Biosciences, School of Marine Biosciences, Kitasato University, 1-15-1 Kitasato, Minami-ku, Sagamihara, Kanagawa 252-0373, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Symbiont transmission is a key event for understanding the processes underlying symbiotic associations and their evolution. However, our understanding of the mechanisms of symbiont transmission remains still fragmentary. The deep-sea clam Calyptogena okutanii harbours obligate sulfur-oxidizing intracellular symbiotic bacteria in the gill epithelial cells. In this study, we determined the localization of their symbiont associating with the spawned eggs, and the population size of the symbiont transmitted via the eggs. We show that the symbionts are located on the outer surface of the egg plasma membrane at the vegetal pole, and that each egg carries approximately 400 symbiont cells, each of which contains close to 10 genomic copies. The very small population size of the symbiont transmitted via the eggs might narrow the bottleneck and increase genetic drift, while polyploidy and its transient extracellular lifestyle might slow the rate of genome reduction. Additionally, the extracellular localization of the symbiont on the egg surface may increase the chance of symbiont exchange. This new type of extracellular transovarial transmission provides insights into complex interactions between the host and symbiont, development of both host and symbiont, as well as the population dynamics underlying genetic drift and genome evolution in microorganisms.

Indexed as

deep-sea clamendosymbiosispopulation sizevertical transmission

Identifiers

PMID27293794
PMCPMC4892456

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.