Evidence map›Paper›PMID 27293319›Full record

ArticleMediators of inflammation2016

Differential Expression of Inflammation-Related Genes in Children with Down Syndrome.

Cláudia Regina Santos Silva, Joice Matos Biselli-Périco, Bruna Lancia Zampieri, Wilson Araujo Silva, Jorge Estefano Santana de Souza, Matheus Carvalho Bürger, Eny Maria Goloni-Bertollo, Érika Cristina Pavarino

Open access · goldAbstract read
In one paragraph

Article in Mediators of inflammation, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. What people with Down Syndrome can teach us about cardiopulmonary disease.European respiratory review : an official journal of the European Respiratory Society · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Cláudia Regina Santos SilvaUnit of Research in Genetics and Molecular Biology (UPGEM), Department of Molecular Biology, Medical School of São José do Rio Preto (FAMERP), 15090-000 São José do Rio Preto, SP, Brazil.
Joice Matos Biselli-PéricoUnit of Research in Genetics and Molecular Biology (UPGEM), Department of Molecular Biology, Medical School of São José do Rio Preto (FAMERP), 15090-000 São José do Rio Preto, SP, Brazil.
Bruna Lancia ZampieriUnit of Research in Genetics and Molecular Biology (UPGEM), Department of Molecular Biology, Medical School of São José do Rio Preto (FAMERP), 15090-000 São José do Rio Preto, SP, Brazil.
Wilson Araujo SilvaDepartment of Genetics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, SP, Brazil; Center for Medical Genomics at HCFMRP/USP, Ribeirão Preto, SP, Brazil; Regional Blood of Ribeirão Preto at HCFMRP/USP, Ribeirão Preto, SP, Brazil.
Jorge Estefano Santana de SouzaInstitute of Bioinformatics and Biotechnology (2bio), Ribeirão Preto, SP, Brazil; Metrópole Digital Institute (IMD), UFRN, Natal, RN, Brazil.
Matheus Carvalho BürgerInstitute of Bioinformatics and Biotechnology (2bio), Ribeirão Preto, SP, Brazil.
Eny Maria Goloni-BertolloUnit of Research in Genetics and Molecular Biology (UPGEM), Department of Molecular Biology, Medical School of São José do Rio Preto (FAMERP), 15090-000 São José do Rio Preto, SP, Brazil.
Érika Cristina PavarinoUnit of Research in Genetics and Molecular Biology (UPGEM), Department of Molecular Biology, Medical School of São José do Rio Preto (FAMERP), 15090-000 São José do Rio Preto, SP, Brazil.
Faculdade de Medicina de São José do Rio Preto · BRUniversidade de São Paulo · BRUniversidade Federal do Rio Grande do Norte · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThe aim of the study was to investigate the expression patterns of a specific set of genes involved in the inflammation process in children with Down Syndrome (DS) and children without the syndrome (control group) to identify differences that may be related to the immune abnormalities observed in DS individuals.

methodRNA samples were obtained from peripheral blood, and gene expression was quantified using the TaqMan® Array Plate Human Inflammation Kit, which facilitated the investigation into 92 inflammation-related genes and four reference genes using real-time polymerase chain reaction (qPCR).

resultsTwenty genes showed differential expression in children with DS; 12 were overexpressed (PLA2G2D, CACNA1D, ALOX12, VCAM1, ICAM1, PLCD1, ADRB1, HTR3A, PDE4C, CASP1, PLA2G5, and PLCB4), and eight were underexpressed (LTA4H, BDKRB1, ADRB2, CD40LG, ITGAM, TNFRSF1B, ITGB1, and TBXAS1). After statistically correcting for the false discovery rate, only the genes BDKRB1 and LTA4H showed differential expression, and both were underexpressed within the DS group.

conclusionDS children showed differential expression of inflammation-related genes that were not located on chromosome 21 compared with children without DS. The BDKRB1 and LTA4H genes may differentiate the case and control groups based on the inflammatory response, which plays an important role in DS pathogenesis.

Indexed as

Adaptor Proteins, Signal TransducingCalcium Channels, L-TypeCaspase 1CD11b AntigenChildChild, PreschoolCyclic Nucleotide Phosphodiesterases, Type 4Down SyndromeFemaleGene Expression ProfilingGroup II Phospholipases A2Group V Phospholipases A2HumansInflammationIntercellular Adhesion Molecule-1Intracellular Signaling Peptides and ProteinsAdaptor Proteins, Signal TransducingADRB1 protein, humanADRB2 protein, humanCACNA1D protein, humanCalcium Channels, L-TypeCaspase 1CD11b AntigenCD40Ig protein, recombinantCyclic Nucleotide Phosphodiesterases, Type 4Group II Phospholipases A2Group V Phospholipases A2HTR3A protein, humanICAM1 protein, humanIntercellular Adhesion Molecule-1Intracellular Signaling Peptides and ProteinsITGAM protein, humanITGB1BP1 protein, humanMembrane ProteinsPDE4C protein, humanPhospholipase C betaPhospholipase C deltaPLA2G2D protein, humanPLA2G5 protein, humanPLCB4 protein, humanPLCD1 protein, humanReceptors, Adrenergic, beta-1Receptors, Adrenergic, beta-2Receptors, Serotonin, 5-HT3Receptors, Tumor Necrosis Factor, Type IIRecombinant Fusion ProteinsTNFRSF1B protein, humanVascular Cell Adhesion Molecule-1

Identifiers

PMID27293319
PMCPMC4879265
OpenAlexW2382916660

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.