Evidence map›Paper›PMID 27292132›Full record

ArticleNature communications2016

Extensive local adaptation within the chemosensory system following Drosophila melanogaster's global expansion.

J Roman Arguello, Margarida Cardoso-Moreira, Jennifer K Grenier, Srikanth Gottipati, Andrew G Clark, Richard Benton

Abstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Proceedings. Biological sciences · 2022
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. The Scent of the Fly.Journal of chemical ecology · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

J Roman ArguelloCenter for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015 Lausanne, Switzerland.
Margarida Cardoso-MoreiraCenter for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015 Lausanne, Switzerland.ORCID 0000-0001-6639-3597
Jennifer K GrenierDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA.
Srikanth GottipatiDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA.
Andrew G ClarkDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA.
Richard BentonCenter for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015 Lausanne, Switzerland.

Funding

European Research Council 615094
6 · The paper itself

Abstract

How organisms adapt to new environments is of fundamental biological interest, but poorly understood at the genetic level. Chemosensory systems provide attractive models to address this problem, because they lie between external environmental signals and internal physiological responses. To investigate how selection has shaped the well-characterized chemosensory system of Drosophila melanogaster, we have analysed genome-wide data from five diverse populations. By couching population genomic analyses of chemosensory protein families within parallel analyses of other large families, we demonstrate that chemosensory proteins are not outliers for adaptive divergence between species. However, chemosensory families often display the strongest genome-wide signals of recent selection within D. melanogaster. We show that recent adaptation has operated almost exclusively on standing variation, and that patterns of adaptive mutations predict diverse effects on protein function. Finally, we provide evidence that chemosensory proteins have experienced relaxed constraint, and argue that this has been important for their rapid adaptation over short timescales.

Indexed as

Adaptation, PhysiologicalAnimalsDrosophila melanogasterDrosophila ProteinsEvolution, MolecularGene Expression ProfilingGene Expression RegulationGenes, InsectGeographyMultigene FamilyMutationPolymorphism, Single NucleotideSense OrgansDrosophila Proteins

Identifiers

PMID27292132
PMCPMC4910016

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.