Evidence map›Paper›PMID 27292112›Full record

ArticleAmerican journal of human genetics2016

Biallelic Mutations of VAC14 in Pediatric-Onset Neurological Disease.

Guy M Lenk, Krystyna Szymanska, Grazyna Debska-Vielhaber, Malgorzata Rydzanicz, Anna Walczak, Monika Bekiesinska-Figatowska, Stefan Vielhaber, Kerstin Hallmann, Piotr Stawinski, Sonja Buehring and 4 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in American journal of human genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
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  8. Review
  9. Blepharoclonus - a novel phenotypic association with a VAC14 variant.Clinical parkinsonism & related disorders · 2025
    Article
  10. Review
  11. Review
  12. Article
  13. Functional genomics and small molecules in mitochondrial neurodevelopmental disorders.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2024
    Review
  14. The signalling lipid PI3,5POpen biology · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Roles of PIKfyve in multiple cellular pathways.Current opinion in cell biology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Guy M LenkDepartment of Human Genetics, University of Michigan, Ann Arbor, MI 48109-5618, USA.
Krystyna SzymanskaDepartment of Child Psychiatry, Warsaw Medical University, 02-106 Warsaw, Poland; Department of Experimental and Clinical Neuropathology, Medical Research Center, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Grazyna Debska-VielhaberKlinik für Neurologie, Universitätsklinikum Magdeburg, 39120 Magdeburg, Germany.
Malgorzata RydzaniczDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland.
Anna WalczakDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland.
Monika Bekiesinska-FigatowskaDepartment of Diagnostic Imaging, Institute of Mother and Child, 01-211 Warsaw, Poland.
Stefan VielhaberKlinik für Neurologie, Universitätsklinikum Magdeburg, 39120 Magdeburg, Germany.
Kerstin HallmannKlinik für Epileptologie and Life&Brain Center, Universitätsklinikum Bonn, 53105 Bonn, Germany.
Piotr StawinskiDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland; Institute of Physiology and Pathology of Hearing, 05-830 Nadarzyn, Poland.
Sonja BuehringMadison, WI 53711, USA.
David A HsuDepartment of Neurology, University of Wisconsin-Madison, Madison, WI 53705, USA.
Wolfram S KunzKlinik für Epileptologie and Life&Brain Center, Universitätsklinikum Bonn, 53105 Bonn, Germany.
Miriam H MeislerDepartment of Human Genetics, University of Michigan, Ann Arbor, MI 48109-5618, USA. Electronic address: meislerm@umich.edu.
Rafal PloskiDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland. Electronic address: rploski@wp.pl.
Medical University of Warsaw · PLKlinikum Magdeburg · DEUniversity Hospital Bonn · DEUniversity of Michigan · USMadison Group (United States) · USUniversity of Wisconsin–Madison · US

Funding

INSERTIONAL MUTANTS AND DEVELOPMENT IN TRANSGENIC MICER01GM024872 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MEISLER, MIRIAM H · 1985 to 2024
$10.7M
NIGMS NIH HHS R01 GM024872
6 · The paper itself

Abstract

In the PI(3,5)P2 biosynthetic complex, the lipid kinase PIKFYVE and the phosphatase FIG4 are bound to the dimeric scaffold protein VAC14, which is composed of multiple heat-repeat domains. Mutations of FIG4 result in the inherited disorders Charcot-Marie-Tooth disease type 4J, Yunis-Varón syndrome, and polymicrogyria with seizures. We here describe inherited variants of VAC14 in two unrelated children with sudden onset of a progressive neurological disorder and regression of developmental milestones. Both children developed impaired movement with dystonia, became nonambulatory and nonverbal, and exhibited striatal abnormalities on MRI. A diagnosis of Leigh syndrome was rejected due to normal lactate profiles. Exome sequencing identified biallelic variants of VAC14 that were inherited from unaffected heterozygous parents in both families. Proband 1 inherited a splice-site variant that results in skipping of exon 13, p.Ile459Profs(∗)4 (not reported in public databases), and the missense variant p.Trp424Leu (reported in the ExAC database in a single heterozygote). Proband 2 inherited two missense variants in the dimerization domain of VAC14, p.Ala582Ser and p.Ser583Leu, that have not been previously reported. Cultured skin fibroblasts exhibited the accumulation of vacuoles that is characteristic of PI(3,5)P2 deficiency. Vacuolization of fibroblasts was rescued by transfection of wild-type VAC14 cDNA. The similar age of onset and neurological decline in the two unrelated children define a recessive disorder resulting from compound heterozygosity for deleterious variants of VAC14.

Indexed as

AllelesMutationAge of OnsetAmino Acid SequenceChildChild, PreschoolExomeExonsFemaleGenes, RecessiveHeterozygoteHumansInfantIntracellular Signaling Peptides and ProteinsMaleMembrane ProteinsIntracellular Signaling Peptides and ProteinsMembrane ProteinsVAC14 protein, human

Identifiers

PMID27292112
PMCPMC5005439
OpenAlexW2410463335

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.