Evidence map›Paper›PMID 27287016›Full record

ArticleMicrobial cell factories2016

Engineered Zymomonas mobilis for salt tolerance using EZ-Tn5-based transposon insertion mutagenesis system.

Jing-Li Wang, Bo Wu, Han Qin, Yang You, Song Liu, Zong-Xia Shui, Fu-Rong Tan, Yan-Wei Wang, Qi-Li Zhu, Yan-Bin Li and 5 more

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Jing-Li WangKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Bo WuKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Han QinKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Yang YouKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Song LiuKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Zong-Xia ShuiKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Fu-Rong TanKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Yan-Wei WangKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Qi-Li ZhuKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Yan-Bin LiXinjiang Production and Construction Corps Key Laboratory of Protection and Utilization of Biological Resources, College of Life Sciences, Tarim University, Tarim Basin, Alaer City, 843300, People's Republic of China.
Zhi-Yong RuanKey Laboratory of Microbial Resources (Ministry of Agriculture, China), Institute of Agricultural Resources and Regional Planning, CAAS, Beijing, 100081, People's Republic of China.
Ke-Dong MaCollege of Environmental and Chemical Engineering, Dalian University, Dalian, 116622, People's Republic of China.
Li-Chun DaiKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Guo-Quan HuKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China.
Ming-Xiong HeKey Laboratory of Development and Application of Rural Renewable Energy (Ministry of Agriculture), Biomass Energy Technology Research Centre, Biogas Institute of Ministry of Agriculture, Section 4-13, Renmin Nanlu, Chengdu, 610041, People's Republic of China. hemingxiong@caas.cn.
Biogas Institute of Ministry of Agriculture · CNDalian University · CNInstitute of Agricultural Resources and Regional Planning · CNXinjiang Production and Construction Corps · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe cell growth and ethanol yield of Zymomonas mobilis may be detrimentally affected by salt stress frequently present in some biomass-based fermentation systems, leading to a decrease in the rate of sugar conversion to ethanol or other bioproducts. To address this problem, improving the salt tolerance of Z. mobilis is a desirable way. However, limited progress has been made in development of Z. mobilis with higher salt tolerance for some technical challenges in the past decades. Recently, transposon insertion mutant system has been widely used as a novel genetic tool in many organisms to develop mutant strains. In this study, Tn5-based transposon insertion mutagenesis system firstly used for construction of higher salt tolerance strain in Z. mobilis.

resultsApproximately 200 Z. mobilis ZM4 mutants were generated by using Tn5-based transposon mutagenesis system. The mutant strain ZMT2 with improved salt tolerance phenotype was obtained by screening on RM agar plates with additional 1 % NaCl. Strain ZMT2 was confirmed to exhibit better fermentation performance under NaCl stress than wild type of strain ZM4. The transposon insertion was located in ZMO1122 (himA) by genome walking. Discruption of himA gene showed that himA may play an important role in response to salt tolerance in Z. mobils.

conclusionsThe mutant strain ZMT2 with a transposon insertion in himA gene of the genome showed obviously higher sugar conversion rate to ethonal under up to 2 % NaCl stress than did the wild ZM4 strain. Besides, ZMT2 exhibited shared fermentative capabilities with wild ZM4 strain under no or low NaCl stress. This report firstly showed that himA played a role in responding to NaCl stress. Furthermore, the result indicated that Tn5-based transposon mutagenesis system was a feasible tool not only for genetic engineering in Z. mobilis strain improvement, but also in tapping resistent genes.

Indexed as

Bacterial ProteinsEthanolGenetic EngineeringGlucoseMutagenesis, InsertionalNADPhenotypeReal-Time Polymerase Chain ReactionSalt ToleranceTransposasesZymomonasBacterial ProteinsEthanolGlucoseNADTn5 transposaseTransposasesGenome walkinghimASalt stressTn5-based transposon mutagenesisZymomonas mobilis

Identifiers

PMID27287016
PMCPMC4901475
OpenAlexW2409011805

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.