Evidence map›Paper›PMID 27286573›Full record

ArticleStem cell research2016

Alcohol-induced suppression of KDM6B dysregulates the mineralization potential in dental pulp stem cells.

Michael Hoang, Jeffrey J Kim, Yiyoung Kim, Elizabeth Tong, Benjamin Trammell, Yao Liu, Songtao Shi, Chang-Ryul Lee, Christine Hong, Cun-Yu Wang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Stem cell research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 57 citations in OpenAlex.

  1. Prenatal and birth-related risk factors for hypomineralised second primary molars: a prospective cohort study.European archives of paediatric dentistry : official journal of the European Academy of Paediatric Dentistry · 2026
    Article
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  15. JMJD3: a critical epigenetic regulator in stem cell fate.Cell communication and signaling : CCS · 2021
    Review
  16. [The Role of Histone Demethylase in Osteogenic and Chondrogenic Differentiation of Mesenchymal Stem Cells: A Literature Review].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2021
    Review
  17. Article
  18. [Enhancer of zeste homolog 2 affects dental pulp inflammation by regulating macrophage chemotaxis].Beijing da xue xue bao. Yi xue ban = Journal of Peking University. Health sciences · 2020
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Michael HoangLaboratory of Stem Cell & Cancer Epigenetic Research, School of Dentistry, UCLA, 10833 Le Conte Avenue, 73-041 CHS, Los Angeles, CA 90095, USA.
Jeffrey J KimLaboratory of Stem Cell & Cancer Epigenetic Research, School of Dentistry, UCLA, 10833 Le Conte Avenue, 73-041 CHS, Los Angeles, CA 90095, USA.
Yiyoung KimLaboratory of Stem Cell & Cancer Epigenetic Research, School of Dentistry, UCLA, 10833 Le Conte Avenue, 73-041 CHS, Los Angeles, CA 90095, USA.
Elizabeth TongLaboratory of Stem Cell & Cancer Epigenetic Research, School of Dentistry, UCLA, 10833 Le Conte Avenue, 73-041 CHS, Los Angeles, CA 90095, USA.
Benjamin TrammellDepartment of Biology, California State University at Northridge, 18111 Nordhoff Street, Northridge, CA 91330, USA.
Yao LiuDepartment of Anatomy and Cell Biology, University of Pennsylvania School of Dental Medicine, 240 South 40th Street, Philadelphia, PA 19104, USA.
Songtao ShiDepartment of Anatomy and Cell Biology, University of Pennsylvania School of Dental Medicine, 240 South 40th Street, Philadelphia, PA 19104, USA.
Chang-Ryul LeeSection of Orthodontics, School of Dentistry, UCLA, 10833 Le Conte Avenue, 63-041 CHS, Los Angeles, CA 90095, USA.
Christine HongSection of Orthodontics, School of Dentistry, UCLA, 10833 Le Conte Avenue, 63-041 CHS, Los Angeles, CA 90095, USA.
Cun-Yu WangLaboratory of Molecular Signaling, Division of Oral Biology and Medicine, School of Dentistry, UCLA, 10833 Le Conte Avenue, 33-030 CHS, Los Angeles, CA 90095, USA; UCLA Broad Stem Cell Research Center, Box 957357, Los Angeles, CA 90095, USA.
Yong KimLaboratory of Stem Cell & Cancer Epigenetic Research, School of Dentistry, UCLA, 10833 Le Conte Avenue, 73-041 CHS, Los Angeles, CA 90095, USA; UCLA Broad Stem Cell Research Center, Box 957357, Los Angeles, CA 90095, USA; UCLA's Jonsson Comprehensive Cancer Center, 8-684 Factor Building, Box 951781, Los Angeles, CA 90095, USA. Electronic address: thadyk@ucla.edu.
University of California, Los Angeles · USCalifornia State University, Northridge · USUniversity of Pennsylvania · US

Funding

Molecular Regulation of Human Dental Stem Cell PropertyR01DE016513 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WANG, CUN-YU · 2005 to 2019
$6.0M
Alcohol-induced epigenetic alterations in human stem cellsR01AA021301 · NIAAA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KIM, YONG · 2011 to 2013
$1.0M
Effect of alcohol on biogenesis and function of amniotic exosomal exRNAR21AA024210 · NIAAA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KIM, YONG · 2016 to 2017
$404k
NIAAA NIH HHS R01 AA021301NIAAA NIH HHS R21 AA024210NIDCR NIH HHS R01 DE016513
6 · The paper itself

Abstract

Epigenetic changes, such as alteration of DNA methylation patterns, have been proposed as a molecular mechanism underlying the effect of alcohol on the maintenance of adult stem cells. We have performed genome-wide gene expression microarray and DNA methylome analysis to identify molecular alterations via DNA methylation changes associated with exposure of human dental pulp stem cells (DPSCs) to ethanol (EtOH). By combined analysis of the gene expression and DNA methylation, we have found a significant number of genes that are potentially regulated by EtOH-induced DNA methylation. As a focused approach, we have also performed a pathway-focused RT-PCR array analysis to examine potential molecular effects of EtOH on genes involved in epigenetic chromatin modification enzymes, fibroblastic markers, and stress and toxicity pathways in DPSCs. We have identified and verified that lysine specific demethylase 6B (KDM6B) was significantly dysregulated in DPSCs upon EtOH exposure. EtOH treatment during odontogenic/osteogenic differentiation of DPSCs suppressed the induction of KDM6B with alterations in the expression of differentiation markers. Knockdown of KDM6B resulted in a marked decrease in mineralization from implanted DPSCs in vivo. Furthermore, an ectopic expression of KDM6B in EtOH-treated DPSCs restored the expression of differentiation-related genes. Our study has demonstrated that EtOH-induced inhibition of KDM6B plays a role in the dysregulation of odontogenic/osteogenic differentiation in the DPSC model. This suggests a potential molecular mechanism for cellular insults of heavy alcohol consumption that can lead to decreased mineral deposition potentially associated with abnormalities in dental development and also osteopenia/osteoporosis, hallmark features of fetal alcohol spectrum disorders.

Indexed as

AdultAlkaline PhosphataseAnimalsCell DifferentiationCells, CulturedDental PulpDNA MethylationEthanolGene ExpressionGene Expression ProfilingHumansJumonji Domain-Containing Histone DemethylasesMiceMice, NudeOdontogenesisOsteogenesisAlkaline PhosphataseEthanolJumonji Domain-Containing Histone DemethylasesKDM6B protein, humanRNA, Small InterferingAlcoholDental pulp stem cells (DPSCs)DNA methylationEpigeneticsMineralizationOdontogenic differentiationOsteogenic differentiation

Identifiers

PMID27286573
PMCPMC5012956
OpenAlexW2418308514

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.