Evidence map›Paper›PMID 27283960›Full record

ArticleParasitology research2016

In silico cloning and B/T cell epitope prediction of triosephosphate isomerase from Echinococcus granulosus.

Fen Wang, Bin Ye

Abstract read
PubMed Publisher
In one paragraph

Article in Parasitology research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Mining the Proteome ofAnimals : an open access journal from MDPI · 2022
    Review
  2. Molecular Characterization of a Tetraspanin TSP11 Gene inFrontiers in veterinary science · 2021
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Fen WangDepartment of Pathogenic Biology, Chongqing Medical University, Chongqing, 400016, China.
Bin YeDepartment of Pathogenic Biology, Chongqing Medical University, Chongqing, 400016, China. yebina@sohu.com.ORCID http://orcid.org/0000-0003-4174-9133
Chongqing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cystic echinococcosis is a worldwide zoonosis caused by Echinococcus granulosus. Because the methods of diagnosis and treatment for cystic echinococcosis were limited, it is still necessary to screen target proteins for the development of new anti-hydatidosis vaccine. In this study, the triosephosphate isomerase gene of E. granulosus was in silico cloned. The B cell and T cell epitopes were predicted by bioinformatics methods. The cDNA sequence of EgTIM was composition of 1094 base pairs, with an open reading frame of 753 base pairs. The deduced amino acid sequences were composed of 250 amino acids. Five cross-reactive epitopes, locating on 21aa-35aa, 43aa-57aa, 94aa-107aa, 115-129aa, and 164aa-183aa, could be expected to serve as candidate epitopes in the development of vaccine against E. granulosus. These results could provide bases for gene cloning, recombinant expression, and the designation of anti-hydatidosis vaccine.

Indexed as

Protein Processing, Post-TranslationalAmino Acid SequenceAnimalsAntigens, HelminthCloning, MolecularComputational BiologyDNA, ComplementaryEchinococcosisEchinococcus granulosusEpitopes, B-LymphocyteEpitopes, T-LymphocyteHumansModels, StructuralOpen Reading FramesPhylogenyProtein Sorting SignalsAntigens, HelminthDNA, ComplementaryEpitopes, B-LymphocyteEpitopes, T-LymphocyteProtein Sorting SignalsTriose-Phosphate IsomeraseBioinformaticsEchinococcus granulosusEpitopesIn silico cloningTriosephosphate isomerase

Identifiers

PMID27283960
OpenAlexW2413098304

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.