Evidence map›Paper›PMID 27282333›Full record

ArticleMolecular microbiology2016

Acidic pH sensing in the bacterial cytoplasm is required for Salmonella virulence.

Jeongjoon Choi, Eduardo A Groisman

Abstract read
In one paragraph

Article in Molecular microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed.

  1. Article
  2. Microorganisms · 2026
    Review
  3. Review
  4. Review
  5. A Ratiometric pH Sensor for Gram-Positive and Gram-Negative Bacteria.Journal of the American Chemical Society · 2026
    Article
  6. Article
  7. Journal of bacteriology · 2026
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Salmonella enterica serovars linked with poultry in India: antibiotic resistance profiles and carriage of virulence genes.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  19. Review
  20. The inhibitory mechanism of a small protein reveals its role in antimicrobial peptide sensing.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jeongjoon ChoiDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT, 06536, USA.
Eduardo A GroismanDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT, 06536, USA. eduardo.groisman@yale.edu.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Expanding the SensingAbilities of Virulence Regulatory SystemsR01AI120558 · NIAID · YALE UNIVERSITY · PI GROISMAN, EDUARDO · 2016 to 2019
$2.2M
Co-opting ancestral regulatory systems to control bacterial virulenceR56AI042236 · NIAID · YALE UNIVERSITY · PI GROISMAN, EDUARDO · 2015 to 2015
$368k
NCATS NIH HHS UL1 TR001863NIAID NIH HHS R01 AI120558NIAID NIH HHS R56 AI042236
6 · The paper itself

Abstract

pH regulates gene expression, biochemical activities and cellular behaviors. A mildly acidic pH activates the master virulence regulatory system PhoP/PhoQ in the facultative intracellular pathogen Salmonella enterica serovar Typhimurium. The sensor PhoQ harbors an extracytoplasmic domain implicated in signal sensing, and a cytoplasmic domain controlling activation of the regulator PhoP. We now report that, surprisingly, a decrease in Salmonella's own cytoplasmic pH induces transcription of PhoP-activated genes even when the extracytoplasmic pH remains neutral. Amino acid substitutions in PhoQ's cytoplasmic domain hindered activation by acidic pH and attenuated virulence in mice, but did not abolish activation by low Mg(2+) or the antimicrobial peptide C18G. Conversely, removal of PhoQ's extracytoplasmic domains prevented the response to the latter PhoQ-activating signals but not to acidic pH. PhoP-dependent genes were minimally induced by acidic pH in the non-pathogenic species Salmonella bongori but were activated by low Mg(2+) and C18G as in pathogenic S. enterica. Our findings indicate that the sensor PhoQ enables S. enterica to respond to both host- and bacterial-derived signals that alter its cytoplasmic pH.

Indexed as

Amino Acid SubstitutionAnimalsAntimicrobial Cationic PeptidesBacterial ProteinsCytoplasmFemaleGene Expression Regulation, BacterialHydrogen-Ion ConcentrationMagnesiumMaleMice, Inbred BALB CPeptidesPhosphorylationSalmonella typhimuriumSignal TransductionTranscription FactorsAntimicrobial Cationic PeptidesBacterial ProteinsC18G peptideMagnesiumPeptidesPhoP protein, BacteriaPhoQ protein, BacteriaTranscription Factors

Identifiers

PMID27282333
PMCPMC5015592

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.