Evidence map›Paper›PMID 27282254›Full record

ArticleLeukemia2016

Genomic disruption of the histone methyltransferase SETD2 in chronic lymphocytic leukaemia.

H Parker, M J J Rose-Zerilli, M Larrayoz, R Clifford, J Edelmann, S Blakemore, J Gibson, J Wang, V Ljungström, T K Wojdacz and 28 more

Open access · hybridAbstract readMulticenter Study
In one paragraph

Article in Leukemia, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 81 citations in OpenAlex.

  1. Trial
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  11. Chromoanagenesis Detection in Chronic Lymphocytic Leukemia.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Leukemia & lymphoma · 2024
    Article
  17. Review
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors at 14 institutions in 6 countries.

H ParkerAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
M J J Rose-ZerilliAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
M LarrayozAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
R CliffordOxford National Institute for Health Research, Biomedical Research Centre/Molecular Diagnostic Centre, University of Oxford, Oxford, UK.
J EdelmannDepartment of Internal Medicine III, Ulm University, Ulm, Germany.
S BlakemoreAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.ORCID 0000-0003-2892-1162
J GibsonCentre for Biological Sciences, Faculty of Natural and Environmental Sciences, University of Southampton, Southampton, UK.ORCID 0000-0002-0973-8285
J WangCentre for Molecular Oncology, Barts Cancer Institute, Queen Mary's, University of London, London, UK.
V LjungströmDepartment of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
T K WojdaczAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
T ChaplinCentre for Molecular Oncology, Barts Cancer Institute, Queen Mary's, University of London, London, UK.
A RoghanianAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
Z DavisDepartment of Molecular Pathology, Royal Bournemouth Hospital, Bournemouth, UK.
A ParkerDepartment of Molecular Pathology, Royal Bournemouth Hospital, Bournemouth, UK.
E TauschDepartment of Internal Medicine III, Ulm University, Ulm, Germany.
S NtoufaInstitute of Applied Biosciences, Center for Research and Technology Hellas, Thessaloniki, Greece.
S RamosOxford National Institute for Health Research, Biomedical Research Centre/Molecular Diagnostic Centre, University of Oxford, Oxford, UK.
P RobbeOxford National Institute for Health Research, Biomedical Research Centre/Molecular Diagnostic Centre, University of Oxford, Oxford, UK.
R AlsolamiOxford National Institute for Health Research, Biomedical Research Centre/Molecular Diagnostic Centre, University of Oxford, Oxford, UK.
A J SteeleAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
G PackhamAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
A E Rodríguez-VicenteDepartment of Haematology, University Hospital of Salamanca-Biomedical Research Institute of Salamanca, IBMCC, Comprehensive Cancer Center Research, University of Salamanca-CSIC, Salamanca, Spain.
L BrownAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
F McNichollDepartment of Haematology, Altnagelvin Area Hospital, Western Health and Social Care Trust, Londonderry, UK.
F ForconiAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
A PettittDepartment of Molecular and Clinical Cancer Medicine, Royal Liverpool and Broadgreen University Hospitals NHS Trust, Liverpool, UK.
P HillmenDepartment of Haematology, St James's University Hospital, Leeds, UK.
M DyerCollege of Medicine, Biological Sciences and Psychology, University of Leicester, Leicester, UK.
M S CraggAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
C ChelalaCentre for Molecular Oncology, Barts Cancer Institute, Queen Mary's, University of London, London, UK.
C C OakesDivision of Hematology, Department of Internal Medicine, The Ohio State University, Columbus, OH, USA.
R RosenquistDepartment of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
K StamatopoulosInstitute of Applied Biosciences, Center for Research and Technology Hellas, Thessaloniki, Greece.
S StilgenbauerDepartment of Internal Medicine III, Ulm University, Ulm, Germany.
S KnightOxford National Institute for Health Research, Biomedical Research Centre/Molecular Diagnostic Centre, University of Oxford, Oxford, UK.
A SchuhOxford National Institute for Health Research, Biomedical Research Centre/Molecular Diagnostic Centre, University of Oxford, Oxford, UK.
D G OscierAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
J C StreffordAcademic Unit of Cancer Sciences, Faculty of Medicine, Cancer Research UK Centre and Experimental Cancer Medicine Centre, University of Southampton, Southampton, UK.
Cancer Research UK · GBNational Institute for Health Research · GBQueen Mary University of London · GBRoyal Bournemouth Hospital · GBUniversität Ulm · DECentre for Research and Technology Hellas · GRUppsala University · SERoyal Liverpool and Broadgreen University Hospital NHS Trust · GBSt James's University Hospital · GBThe Ohio State University · USUniversidad de Salamanca · ESUniversity of Leicester · GBUniversity of Southampton · GBUniversity of Ulster · GB

Funding

Cancer Research UK C24563/A15581Cancer Research UK C34999/A18087Department of Health 07/01/38
6 · The paper itself

Abstract

Histone methyltransferases (HMTs) are important epigenetic regulators of gene transcription and are disrupted at the genomic level in a spectrum of human tumours including haematological malignancies. Using high-resolution single nucleotide polymorphism (SNP) arrays, we identified recurrent deletions of the SETD2 locus in 3% (8/261) of chronic lymphocytic leukaemia (CLL) patients. Further validation in two independent cohorts showed that SETD2 deletions were associated with loss of TP53, genomic complexity and chromothripsis. With next-generation sequencing we detected mutations of SETD2 in an additional 3.8% of patients (23/602). In most cases, SETD2 deletions or mutations were often observed as a clonal event and always as a mono-allelic lesion, leading to reduced mRNA expression in SETD2-disrupted cases. Patients with SETD2 abnormalities and wild-type TP53 and ATM from five clinical trials employing chemotherapy or chemo-immunotherapy had reduced progression-free and overall survival compared with cases wild type for all three genes. Consistent with its postulated role as a tumour suppressor, our data highlight SETD2 aberration as a recurrent, early loss-of-function event in CLL pathobiology linked to aggressive disease.

Indexed as

GenomicsMutationAtaxia Telangiectasia Mutated ProteinsDisease-Free SurvivalFemaleGenes, Tumor SuppressorHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHumansLeukemia, Lymphocytic, Chronic, B-CellMalePrognosisSurvival RateTumor Suppressor Protein p53Ataxia Telangiectasia Mutated ProteinsHistone-Lysine N-MethyltransferaseHistone MethyltransferasesSETD2 protein, humanTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID27282254
PMCPMC5023049
OpenAlexW2415930204

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.