Evidence map›Paper›PMID 27280692›Full record

ArticleGenetics2016

Plasticity in the Meiotic Epigenetic Landscape of Sex Chromosomes in Caenorhabditis Species.

Braden J Larson, Mike V Van, Taylor Nakayama, JoAnne Engebrecht

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
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  7. Article
  8. Genome editing in the nematodeBiology methods & protocols · 2020
    Article
  9. Epigenetics in Turner syndrome.Clinical epigenetics · 2018
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Braden J LarsonDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616.
Mike V VanDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616.
Taylor NakayamaDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616.
JoAnne EngebrechtDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616 jengebrecht@ucdavis.edu.ORCID 0000-0002-2733-7506
University of California, Davis · US

Funding

Sex-specific regulation of meiosisR01GM103860 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ENGEBRECHT, JOANNE · 2013 to 2021
$2.4M
NIGMS NIH HHS R01 GM103860
6 · The paper itself

Abstract

During meiosis in the heterogametic sex in some species, sex chromosomes undergo meiotic sex chromosome inactivation (MSCI), which results in acquisition of repressive chromatin and transcriptional silencing. In Caenorhabditis elegans, MSCI is mediated by MET-2 methyltransferase deposition of histone H3 lysine 9 dimethylation. Here we examined the meiotic chromatin landscape in germ lines of four Caenorhabditis species; C. remanei and C. brenneri represent ancestral gonochorism, while C. briggsae and C. elegans are two lineages that independently evolved hermaphroditism. While MSCI is conserved across all four species, repressive chromatin modifications are distinct and do not correlate with reproductive mode. In contrast to C. elegans and C. remanei germ cells where X chromosomes are enriched for histone H3 lysine 9 dimethylation, X chromosomes in C. briggsae and C. brenneri germ cells are enriched for histone H3 lysine 9 trimethylation. Inactivation of C. briggsae MET-2 resulted in germ-line X chromosome transcription and checkpoint activation. Further, both histone H3 lysine 9 di- and trimethylation were reduced in Cbr-met-2 mutant germ lines, suggesting that in contrast to C. elegans, H3 lysine 9 di- and trimethylation are interdependent. C. briggsae H3 lysine 9 trimethylation was redistributed in the presence of asynapsed chromosomes in a sex-specific manner in the related process of meiotic silencing of unsynapsed chromatin. However, these repressive marks did not influence X chromosome replication timing. Examination of additional Caenorhabditis species revealed diverse H3 lysine 9 methylation patterns on the X, suggesting that the sex chromosome epigenome evolves rapidly.

Indexed as

EpigenomicsAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsChromatin Assembly and DisassemblyEvolution, MolecularGerm CellsHistone DemethylasesHistone-Lysine N-MethyltransferaseMeiosisMutationSex ChromosomesX Chromosome InactivationCaenorhabditis elegans ProteinsHistone DemethylasesHistone-Lysine N-MethyltransferaseMet-2 protein, C elegansgenetics of sexhistone methyltransferasesmeiosisMSCIMSUCsex chromosomes

Identifiers

PMID27280692
PMCPMC4981267
OpenAlexW2417342654

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.