Evidence map›Paper›PMID 27279605›Full record

ArticleJournal of virology2016

P3N-PIPO, a Frameshift Product from the P3 Gene, Pleiotropically Determines the Virulence of Clover Yellow Vein Virus in both Resistant and Susceptible Peas.

Go Atsumi, Haruka Suzuki, Yuri Miyashita, Sun Hee Choi, Yusuke Hisa, Shunsuke Rihei, Ryoko Shimada, Eun Jin Jeon, Junya Abe, Kenji S Nakahara and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Role of the Genetic Background in Resistance to Plant Viruses.International journal of molecular sciences · 2018
    Pooled it
  2. Journal of virology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Go AtsumiGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan go-atsumi@aist.go.jp knakahar@res.agr.hokudai.ac.jp.
Haruka SuzukiGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan.
Yuri MiyashitaGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan.
Sun Hee ChoiGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan.
Yusuke HisaGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan.
Shunsuke RiheiGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan.
Ryoko ShimadaGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan.
Eun Jin JeonGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan.
Junya AbeGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan.
Kenji S NakaharaGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan go-atsumi@aist.go.jp knakahar@res.agr.hokudai.ac.jp.
Ichiro UyedaGraduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido, Japan.
Hokkaido University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledPeas carrying the cyv1 recessive resistance gene are resistant to clover yellow vein virus (ClYVV) isolates No.30 (Cl-No.30) and 90-1 (Cl-90-1) but can be infected by a derivative of Cl-90-1 (Cl-90-1 Br2). The main determinant for the breaking of cyv1 resistance by Cl-90-1 Br2 is P3N-PIPO produced from the P3 gene via transcriptional slippage, and the higher level of P3N-PIPO produced by Cl-90-1 Br2 than by Cl-No.30 contributes to the breaking of resistance. Here we show that P3N-PIPO is also a major virulence determinant in susceptible peas that possess another resistance gene, Cyn1, which does not inhibit systemic infection with ClYVV but causes hypersensitive reaction-like lethal systemic cell death. We previously assumed that the susceptible pea cultivar PI 226564 has a weak allele of Cyn1 Cl-No.30 did not induce cell death, but Cl-90-1 Br2 killed the plants. Our results suggest that P3N-PIPO is recognized by Cyn1 and induces cell death. Unexpectedly, heterologously strongly expressed P3N-PIPO of Cl-No.30 appears to be recognized by Cyn1 in PI 226564. The level of P3N-PIPO accumulation from the P3 gene of Cl-No.30 was significantly lower than that of Cl-90-1 Br2 in a Nicotiana benthamiana transient assay. Therefore, Cyn1-mediated cell death also appears to be determined by the level of P3N-PIPO. The more efficiently a ClYVV isolate broke cyv1 resistance, the more it induced cell death systemically (resulting in a loss of the environment for virus accumulation) in susceptible peas carrying Cyn1, suggesting that antagonistic pleiotropy of P3N-PIPO controls the resistance breaking of ClYVV. IMPORTANCE: Control of plant viral disease has relied on the use of resistant cultivars; however, emerging mutant viruses have broken many types of resistance. Recently, we revealed that Cl-90-1 Br2 breaks the recessive resistance conferred by cyv1, mainly by accumulating a higher level of P3N-PIPO than that of the nonbreaking isolate Cl-No.30. Here we show that a susceptible pea line recognized the increased amount of P3N-PIPO produced by Cl-90-1 Br2 and activated the salicylic acid-mediated defense pathway, inducing lethal systemic cell death. We found a gradation of virulence among ClYVV isolates in a cyv1-carrying pea line and two susceptible pea lines. This study suggests a trade-off between breaking of recessive resistance (cyv1) and host viability; the latter is presumably regulated by the dominant Cyn1 gene, which may impose evolutionary constraints upon P3N-PIPO for overcoming resistance. We propose a working model of the host strategy to sustain the durability of resistance and control fast-evolving viruses.

Indexed as

Frameshifting, RibosomalCell DeathDisease ResistanceNicotianaPisum sativumPlant DiseasesPotyvirusViral ProteinsVirulenceVirulence FactorsViral ProteinsVirulence Factors

Identifiers

PMID27279605
PMCPMC4984661
OpenAlexW2419479960

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.