Evidence map›Paper›PMID 27279225›Full record

ArticleNature2016

Development of the gut microbiota and mucosal IgA responses in twins and gnotobiotic mice.

Joseph D Planer, Yangqing Peng, Andrew L Kau, Laura V Blanton, I Malick Ndao, Phillip I Tarr, Barbara B Warner, Jeffrey I Gordon

Abstract readTwin Study
In one paragraph

Article in Nature, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 167 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
167citing papers in PubMed, 1 pooled it
20.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

167 citing papers in PubMed, 1 synthesis or guideline pooled it, 316 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Bursa of Fabricius-independent B cells establish an IgA-mediated intestinal barrier that safeguards gut-liver homeostasis.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Infant growth and breastfeeding patterns: The Japan Environment and Children's Study.Clinical pediatric endocrinology : case reports and clinical investigations : official journal of the Japanese Society for Pediatric Endocrinology · 2026
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Single-cell quantification of the microbiota by flow cytometry: MicFLY.bioRxiv : the preprint server for biology · 2025
    Article
  17. Review
  18. Article
  19. Article
  20. Article

107 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Joseph D PlanerCenter for Genome Sciences &Systems Biology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Yangqing PengCenter for Genome Sciences &Systems Biology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Andrew L KauCenter for Genome Sciences &Systems Biology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Laura V BlantonCenter for Genome Sciences &Systems Biology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
I Malick NdaoDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Phillip I TarrDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Barbara B WarnerDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Jeffrey I GordonCenter for Genome Sciences &Systems Biology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Washington University in St. Louis · US

Funding

NATIONAL RESEARCH SERVICE AWARD-MEDICAL SCIENTISTT32GM007200 · NIGMS · WASHINGTON UNIVERSITY · PI YOKOYAMA, WAYNE M. · 1985 to 2024
$59.8M
Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
TRAINING PROGRAM IN CELLULAR AND MOLECULAR BIOLOGYT32GM007067 · NIGMS · WASHINGTON UNIVERSITY · PI TRUE-KROB, HEATHER L · 1985 to 2020
$20.4M
REGULATION OF GENE EXPRESSION - SMALL INTESTINER01DK030292 · NIDDK · WASHINGTON UNIVERSITY · PI JEFFREY I GORDON, ANDREI L OSTERMAN · 1986 to 2026
$6.5M
REGULATION OF GENE EXPRESSION IN THE SMALL INTESTINER37DK030292 · NIDDK · WASHINGTON UNIVERSITY · PI GORDON, JEFFREY I · 1993 to 2015
$4.0M
THE MICROBIOTA AND MUCOSAL IMMUNE RESPONSES IN THE DEVELOPMENT OF ASTHMAK08AI113184 · NIAID · WASHINGTON UNIVERSITY · PI KAU, ANDREW LEON · 2015 to 2019
$792k
NIAID NIH HHS K08 AI113184NIDDK NIH HHS DK052574NIDDK NIH HHS DK30292NIDDK NIH HHS P30 DK052574NIDDK NIH HHS R01 DK030292NIDDK NIH HHS R37 DK030292NIGMS NIH HHS GM007200NIGMS NIH HHS T32 GM007067NIGMS NIH HHS T32 GM007200
6 · The paper itself

Abstract

Immunoglobulin A (IgA), the major class of antibody secreted by the gut mucosa, is an important contributor to gut barrier function. The repertoire of IgA bound to gut bacteria reflects both T-cell-dependent and -independent pathways, plus glycans present on the antibody's secretory component. Human gut bacterial taxa targeted by IgA in the setting of barrier dysfunction are capable of producing intestinal pathology when isolated and transferred to gnotobiotic mice. A complex reorientation of gut immunity occurs as infants transition from passively acquired IgA present in breast milk to host-derived IgA. How IgA responses co-develop with assembly of the microbiota during this period remains poorly understood. Here, we (1) identify a set of age-discriminatory bacterial taxa whose representations define a program of microbiota assembly and maturation during the first 2 postnatal years that is shared across 40 healthy twin pairs in the USA; (2) describe a pattern of progression of gut mucosal IgA responses to bacterial members of the microbiota that is highly distinctive for family members (twin pairs) during the first several postnatal months then generalizes across pairs in the second year; and (3) assess the effects of zygosity, birth mode, and breast feeding. Age-associated differences in these IgA responses can be recapitulated in young germ-free mice, colonized with faecal microbiota obtained from two twin pairs at 6 and 18 months of age, and fed a sequence of human diets that simulate the transition from milk feeding to complementary foods. Most of these responses were robust to diet, suggesting that 'intrinsic' properties of community members play a dominant role in dictating IgA responses. The approach described can be used to define gut mucosal immune development in health and disease states and to help discover ways of repairing or preventing perturbations in this facet of host immunity.

Indexed as

Germ-Free LifeModels, AnimalTwinsAgingAnimalsBreast FeedingChild, PreschoolDietFecal Microbiota TransplantationFemaleGastrointestinal MicrobiomeHealthy VolunteersHumansImmunity, MucosalImmunoglobulin AInfantImmunoglobulin A

Identifiers

PMID27279225
PMCPMC4902178
OpenAlexW2395163093

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.