Evidence map›Paper›PMID 27279139›Full record

ArticleScientific reports2016

Multiplex giant magnetoresistive biosensor microarrays identify interferon-associated autoantibodies in systemic lupus erythematosus.

Jung-Rok Lee, D James Haddon, Hannah E Wand, Jordan V Price, Vivian K Diep, Drew A Hall, Michelle Petri, Emily C Baechler, Imelda M Balboni, Paul J Utz and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 2 pooled it
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 2 syntheses or guidelines pooled it, 35 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Article
  5. Engineering Innovative Interfaces for Point-of-Care Diagnostics.Current opinion in colloid & interface science · 2023
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  9. Giant Magnetoresistance Biosensors in Biomedical Applications.ACS applied materials & interfaces · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Jung-Rok LeeDepartment of Mechanical Engineering, Stanford University, Stanford, California, USA.
D James HaddonDepartment of Medicine, Division of Immunology and Rheumatology, Stanford University, Stanford, California, USA.
Hannah E WandDepartment of Medicine, Division of Immunology and Rheumatology, Stanford University, Stanford, California, USA.
Jordan V PriceDepartment of Molecular and Cell Biology, Division of Immunology and Pathogenesis, University of California, Berkeley, California, USA.
Vivian K DiepDepartment of Medicine, Division of Immunology and Rheumatology, Stanford University, Stanford, California, USA.
Drew A HallDepartment of Electrical and Computer Engineering, University of California, San Diego, California, USA.
Michelle PetriDivision of Rheumatology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Emily C BaechlerCenter for Immunology, University of Minnesota Medical School, Minneapolis, Minnesota, USA.
Imelda M BalboniDepartment of Pediatrics, Division of Allergy, Immunology and Rheumatology, Stanford University, Stanford, California, USA.
Paul J UtzDepartment of Medicine, Division of Immunology and Rheumatology, Stanford University, Stanford, California, USA.
Shan X WangDepartment of Materials Science and Engineering, Stanford University, Stanford, California, USA.
Stanford University · USJohns Hopkins University · USUniversity of California, Berkeley · USUniversity of California, San Diego · USUniversity of Minnesota Medical Center · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007365 · NIGMS · STANFORD UNIVERSITY · PI CHUA, KATRIN F · 1985 to 2021
$33.8M
Autoimmunity Center of Excellence Clinical Research ProgramUM1AI110498 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WOFSY, DAVID · 2014 to 2019
$31.4M
Vaccination and infection: indicators of immunological health and responsivenessU19AI090019 · NIAID · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 2010 to 2015
$17.3M
TRANS-NETWORK PROJECTSU54CA143907 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GROSS, MITCHELL E · 2009 to 2013
$15.2M
Pilot ProjectsU54CA151459 · NCI · STANFORD UNIVERSITY · PI GAMBHIR, SANJIV S · 2010 to 2014
$12.6M
Lupus CohortR01AR043727 · NIAMS · JOHNS HOPKINS UNIVERSITY · PI PETRI, MICHELLE A · 1997 to 2015
$8.2M
Tissue Acquisition Research GroupUM2AR067678 · NIAMS · STANFORD UNIVERSITY · PI HOLERS, VERNON MICHAEL, UTZ, PAUL JOSEPH · 2014 to 2020
$8.2M
Ultra-Fast Epigenomic Maps for Monitoring AutoimmunityU19AI110491 · NIAID · STANFORD UNIVERSITY · PI UTZ, PAUL JOSEPH · 2014 to 2018
$3.6M
Th17 lymphocytes in human autoimmune diseasesU19AI082719 · NIAID · STANFORD UNIVERSITY · PI FATHMAN, CHARLES GARRISON · 2009 to 2013
$3.4M
Stanford Technology Accelerating Medicines Partnership CenterUH2AR067676 · NIAMS · STANFORD UNIVERSITY · PI ROBINSON, WILLIAM H, UTZ, PAUL JOSEPH · 2014 to 2020
$2.6M
CIHRNCI NIH HHS U54 CA143907NCI NIH HHS U54 CA151459NHLBI NIH HHS HHSN268201000034CNIAID NIH HHS U19 AI082719NIAID NIH HHS U19 AI090019NIAID NIH HHS U19 AI110491NIAID NIH HHS UM1 AI110498NIAMS NIH HHS R01 AR043727NIAMS NIH HHS UH2 AR067676NIAMS NIH HHS UM2 AR067678NIGMS NIH HHS T32 GM007365
6 · The paper itself

Abstract

High titer, class-switched autoantibodies are a hallmark of systemic lupus erythematosus (SLE). Dysregulation of the interferon (IFN) pathway is observed in individuals with active SLE, although the association of specific autoantibodies with chemokine score, a combined measurement of three IFN-regulated chemokines, is not known. To identify autoantibodies associated with chemokine score, we developed giant magnetoresistive (GMR) biosensor microarrays, which allow the parallel measurement of multiple serum antibodies to autoantigens and peptides. We used the microarrays to analyze serum samples from SLE patients and found individuals with high chemokine scores had significantly greater reactivity to 13 autoantigens than individuals with low chemokine scores. Our findings demonstrate that multiple autoantibodies, including antibodies to U1-70K and modified histone H2B tails, are associated with IFN dysregulation in SLE. Further, they show the microarrays are capable of identifying autoantibodies associated with relevant clinical manifestations of SLE, with potential for use as biomarkers in clinical practice.

Indexed as

AutoantibodiesBiosensing TechniquesCase-Control StudiesHumansImmunoassayInterferonsLupus Erythematosus, SystemicMolecular Diagnostic TechniquesProtein Array AnalysisRibonucleoprotein, U1 Small NuclearSensitivity and SpecificityAutoantibodiesInterferonsRibonucleoprotein, U1 Small NuclearSNRNP70 protein, human

Identifiers

PMID27279139
PMCPMC4899742
OpenAlexW2409725731

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.