Evidence map›Paper›PMID 27276658›Full record

ArticleMolecular plant pathology2017

Homologues of CsLOB1 in citrus function as disease susceptibility genes in citrus canker.

Junli Zhang, Jose Carlos Huguet-Tapia, Yang Hu, Jeffrey Jones, Nian Wang, Sanzhen Liu, Frank F White

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 63 citations in OpenAlex.

  1. eLife · 2024
    Article
  2. Article
  3. Generation of transgene-free canker-resistantFrontiers in plant science · 2024
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  5. Article
  6. Article
  7. Article
  8. ZmLBD2 a maize (Frontiers in plant science · 2022
    Article
  9. Base Editors for Citrus Gene Editing.Frontiers in genome editing · 2022
    Article
  10. Article
  11. Article
  12. Review
  13. Contribution of Omics and Systems Biology to Plant Biotechnology.Advances in experimental medicine and biology · 2021
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Junli ZhangDepartment of Plant Pathology, University of Florida, Gainesville, FL, USA 32611.
Jose Carlos Huguet-TapiaDepartment of Plant Pathology, University of Florida, Gainesville, FL, USA 32611.
Yang HuDepartment of Plant Pathology, University of Florida, Gainesville, FL, USA 32611.
Jeffrey JonesDepartment of Plant Pathology, University of Florida, Gainesville, FL, USA 32611.
Nian WangCitrus Research and Education Center/Department of Microbiology and Cell Science, University of Florida, Lake Alfred, FL, USA 33850.
Sanzhen LiuDepartment of Plant Pathology, Kansas State University, Manhattan, KS, USA 66506.
Frank F WhiteDepartment of Plant Pathology, University of Florida, Gainesville, FL, USA 32611.
University of Florida · USKansas State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The lateral organ boundary domain (LBD) genes encode a group of plant-specific proteins that function as transcription factors in the regulation of plant growth and development. Citrus sinensis lateral organ boundary 1 (CsLOB1) is a member of the LBD family and functions as a disease susceptibility gene in citrus bacterial canker (CBC). Thirty-four LBD members have been identified from the Citrus sinensis genome. We assessed the potential for additional members of LBD genes in citrus to function as surrogates for CsLOB1 in CBC, and compared host gene expression on induction of different LBD genes. Using custom-designed transcription activator-like (TAL) effectors, two members of the same clade as CsLOB1, named CsLOB2 and CsLOB3, were found to be capable of functioning similarly to CsLOB1 in CBC. RNA sequencing and quantitative reverse transcription-polymerase chain reaction analyses revealed a set of cell wall metabolic genes that are associated with CsLOB1, CsLOB2 and CsLOB3 expression and may represent downstream genes involved in CBC.

Indexed as

Citrus sinensisDisease SusceptibilityGenome, PlantPlant DiseasesPlant ProteinsPlant Proteinscitrus bacterial cankerlateral organ boundary domain (LBD) genessusceptibility (S) genes

Identifiers

PMID27276658
PMCPMC6638217
OpenAlexW2414510441

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.