Evidence map›Paper›PMID 27275483›Full record

ArticleAnnals of translational medicine2016

Gene expression profile of THP-1 cells treated with heat-killed Candida albicans.

Zhi-De Hu, Ting-Ting Wei, Qing-Qin Tang, Ning Ma, Li-Li Wang, Bao-Dong Qin, Jian-Rong Yin, Lin Zhou, Ren-Qian Zhong

Abstract read
In one paragraph

Article in Annals of translational medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Oxidative medicine and cellular longevity · 2020
    Article
  3. THP-1 cells as a model for human monocytes.Annals of translational medicine · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zhi-De Hu1 Department of Laboratory Medicine, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China ; 2 Department of Laboratory Medicine, General Hospital, Ji'nan Military Region of PLA, Ji'nan 250031, China.
Ting-Ting Wei1 Department of Laboratory Medicine, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China ; 2 Department of Laboratory Medicine, General Hospital, Ji'nan Military Region of PLA, Ji'nan 250031, China.
Qing-Qin Tang1 Department of Laboratory Medicine, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China ; 2 Department of Laboratory Medicine, General Hospital, Ji'nan Military Region of PLA, Ji'nan 250031, China.
Ning Ma1 Department of Laboratory Medicine, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China ; 2 Department of Laboratory Medicine, General Hospital, Ji'nan Military Region of PLA, Ji'nan 250031, China.
Li-Li Wang1 Department of Laboratory Medicine, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China ; 2 Department of Laboratory Medicine, General Hospital, Ji'nan Military Region of PLA, Ji'nan 250031, China.
Bao-Dong Qin1 Department of Laboratory Medicine, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China ; 2 Department of Laboratory Medicine, General Hospital, Ji'nan Military Region of PLA, Ji'nan 250031, China.
Jian-Rong Yin1 Department of Laboratory Medicine, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China ; 2 Department of Laboratory Medicine, General Hospital, Ji'nan Military Region of PLA, Ji'nan 250031, China.
Lin Zhou1 Department of Laboratory Medicine, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China ; 2 Department of Laboratory Medicine, General Hospital, Ji'nan Military Region of PLA, Ji'nan 250031, China.
Ren-Qian Zhong1 Department of Laboratory Medicine, Changzheng Hospital, Second Military Medical University, Shanghai 200003, China ; 2 Department of Laboratory Medicine, General Hospital, Ji'nan Military Region of PLA, Ji'nan 250031, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMechanisms under immune response against Candida albicans (C. albicans) remain largely unknown. To better understand the mechanisms of innate immune response against C. albicans, we analyzed the gene expression profile of THP-1 cells stimulated with heat-killed C. albicans.

methodsTHP-1 cells were stimulated with heat-killed C. albicans for 9 hours at a ratio of 1:1, and gene expression profile of the cells was analyzed using Whole Human Genome Oligo Microarray. Differentially expressed genes were defined as change folds more than 2 and with statistical significance. Gene ontology (GO) and pathway analysis were used to systematically identify biological connections of differentially expressed genes, as well as the pathways associated with the immune response against C. albicans.

resultsA total of 355 genes were up-regulated and 715 genes were down-regulated significantly. The up-regulated genes were particularly involved in biological process of RNA processing and pathway of the spliceosome. In case of down-regulated genes, the particularly involved immune-related pathways were G-protein coupled receptor signaling pathway, calcium signaling pathway, MAPK signaling pathway and Ras pathway.

conclusionsWe depict the gene expression profile of heat-killed C. albicans stimulated THP-1 cells, and identify the major pathways involved in immune response against C. albicans. These pathways are potential candidate targets for developing anti-C. albicans agent.

Indexed as

Candida albicans (C. albicans)Gene expression profilemicroarrayTHP-1 cells

Identifiers

PMID27275483
PMCPMC4876266

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