Evidence map›Paper›PMID 27273866›Full record

ArticleMolecular and cellular biology2016

Coordinated Action of Nap1 and RSC in Disassembly of Tandem Nucleosomes.

Rashmi Prasad, Sheena D'Arcy, Arjan Hada, Karolin Luger, Blaine Bartholomew

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Specialized RSC: Substrate Specificities for a Conserved Chromatin Remodeler.BioEssays : news and reviews in molecular, cellular and developmental biology · 2020
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Rashmi PrasadUniversity of Texas M. D. Anderson Cancer Center, Department of Epigenetics and Molecular Carcinogenesis, Smithville, Texas, USA Center for Cancer Epigenetics, University of Texas M. D. Anderson Cancer Center, Smithville, Texas, USA.
Sheena D'ArcyUniversity of Colorado at Boulder, Department of Chemistry and Biochemistry, Boulder, Colorado, USA The University of Texas at Dallas, Department of Chemistry and Biochemistry, Dallas, Texas, USA.
Arjan HadaUniversity of Texas M. D. Anderson Cancer Center, Department of Epigenetics and Molecular Carcinogenesis, Smithville, Texas, USA.
Karolin LugerUniversity of Colorado at Boulder, Department of Chemistry and Biochemistry, Boulder, Colorado, USA Howard Hughes Medical Institute, University of Colorado at Boulder, Boulder, Colorado, USA.
Blaine BartholomewUniversity of Texas M. D. Anderson Cancer Center, Department of Epigenetics and Molecular Carcinogenesis, Smithville, Texas, USA Center for Cancer Epigenetics, University of Texas M. D. Anderson Cancer Center, Smithville, Texas, USA bbartholomew@mdanderson.org.
The University of Texas MD Anderson Cancer Center · USHoward Hughes Medical Institute · USUniversity of Colorado Boulder · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
TRANSCRIPTIONAL ACTIVATION BY REORGANIZING CHROMATINR01GM048413 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BARTHOLOMEW, BLAINE · 1998 to 2015
$4.7M
Structure and Function of Nucleosome Assembly Protein 1R01GM067777 · NIGMS · UNIVERSITY OF COLORADO · PI LUGER, KAROLIN · 2003 to 2015
$3.7M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA016672NIGMS NIH HHS R01 GM048413NIGMS NIH HHS R01 GM067777
6 · The paper itself

Abstract

The SWI/SNF and RSC family of ATP-dependent chromatin remodelers disassembles nucleosomes by moving nucleosomes into the vicinity of adjoining nucleosomes. We found that the histone chaperone Nap1 efficiently promotes disassembly of adjacent nucleosomes with which RSC collides and not the disassembly of nucleosomes mobilized by RSC. Nap1 is specific to RSC, as it does not target SWI/SNF, its paralog in Saccharomyces cerevisiae Extensive mutational analysis of Nap1 has revealed that Nap1 affinity for histones H2A-H2B and H3-H4 and its ability to displace histones from DNA are required for Nap1 to enhance RSC-mediated disassembly. Other histone chaperones, such as Vps75, that also bind histones are not able to enhance RSC-mediated disassembly. Our study suggests a mechanism by which Nap1 is recruited to actively transcribed regions and assists in the passage of the transcription complex through chromatin, and it provides a novel mechanism for the coordinated action of RSC and Nap1.

Indexed as

ChromatinDNA-Binding ProteinsDNA Mutational AnalysisHistonesModels, MolecularNucleosome Assembly Protein 1NucleosomesProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsTranscription, GeneticChromatinDNA-Binding ProteinsHistonesNAP1 protein, S cerevisiaeNucleosome Assembly Protein 1NucleosomesRSC complex, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID27273866
PMCPMC4985928
OpenAlexW2411331143

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.