Evidence map›Paper›PMID 27272642›Full record

ArticlePLoS genetics2016

Msa1 and Msa2 Modulate G1-Specific Transcription to Promote G1 Arrest and the Transition to Quiescence in Budding Yeast.

Shawna Miles, Matthew W Croxford, Amali P Abeysinghe, Linda L Breeden

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. The longevity and reversibility of quiescence inCell cycle (Georgetown, Tex.) · 2023
    Article
  5. Article
  6. BY4741 cannot enter quiescence from rich medium.microPublication biology · 2023
    Article
  7. Quiescence inAnnual review of genetics · 2022
    Review
  8. A commonmicroPublication biology · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Shawna MilesBasic Science Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Matthew W CroxfordBasic Science Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Amali P AbeysingheBasic Science Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Linda L BreedenBasic Science Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Fred Hutch Cancer Center · US

Funding

Budding yeast longevityR21AG048595 · NIA · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BREEDEN, LINDA L. · 2014 to 2015
$477k
NIA NIH HHS R21 AG048595
6 · The paper itself

Abstract

Yeast that naturally exhaust their glucose source can enter a quiescent state that is characterized by reduced cell size, and high cell density, stress tolerance and longevity. The transition to quiescence involves highly asymmetric cell divisions, dramatic reprogramming of transcription and global changes in chromatin structure and chromosome topology. Cells enter quiescence from G1 and we find that there is a positive correlation between the length of G1 and the yield of quiescent cells. The Swi4 and Swi6 transcription factors, which form the SBF transcription complex and promote the G1 to S transition in cycling cells, are also critical for the transition to quiescence. Swi6 forms a second complex with Mbp1 (MBF), which is not required for quiescence. These are the functional analogues of the E2F complexes of higher eukaryotes. Loss of the RB analogue, Whi5, and the related protein Srl3/Whi7, delays G1 arrest, but it also delays recovery from quiescence. Two MBF- and SBF-Associated proteins have been identified that have little effect on SBF or MBF activity in cycling cells. We show that these two related proteins, Msa1 and Msa2, are specifically required for the transition to quiescence. Like the E2F complexes that are quiescence-specific, Msa1 and Msa2 are required to repress the transcription of many SBF target genes, including SWI4, the CLN2 cyclin and histones, specifically after glucose is exhausted from the media. They also activate transcription of many MBF target genes. msa1msa2 cells fail to G1 arrest and rapidly lose viability upon glucose exhaustion. msa1msa2 mutants that survive this transition are very large, but they attain the same thermo-tolerance and longevity of wild type quiescent cells. This indicates that Msa1 and Msa2 are required for successful transition to quiescence, but not for the maintenance of that state.

Indexed as

DNA-Binding ProteinsFungal ProteinsG1 Phase Cell Cycle CheckpointsGene Expression Regulation, FungalMerozoite Surface Protein 1Myelin Basic ProteinSaccharomycetalesS PhaseTranscription FactorsTranscription, GeneticDNA-Binding ProteinsFungal ProteinsMerozoite Surface Protein 1Myelin Basic ProteinTranscription Factors

Identifiers

PMID27272642
PMCPMC4894574
OpenAlexW2411826851

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.