Evidence map›Paper›PMID 27272408›Full record

ArticleClinical genetics2016

Whole exome sequencing identifies multiple diagnoses in congenital glaucoma with systemic anomalies.

L M Reis, R C Tyler, E Weh, K E Hendee, K F Schilter, J A Phillips, S Sequeira, A Schinzel, E V Semina

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Clinical genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Structural Variant Disrupting the Expression of the RemoteInternational journal of molecular sciences · 2024
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  9. Review
  10. Two novel variants inInternational journal of ophthalmology · 2019
    Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

L M ReisDepartment of Pediatrics and Children's Research Institute, Medical College of Wisconsin and Children's Hospital of Wisconsin, Milwaukee, WI, USA.
R C TylerDepartment of Pediatrics and Children's Research Institute, Medical College of Wisconsin and Children's Hospital of Wisconsin, Milwaukee, WI, USA.
E WehDepartment of Pediatrics and Children's Research Institute, Medical College of Wisconsin and Children's Hospital of Wisconsin, Milwaukee, WI, USA.
K E HendeeDepartment of Pediatrics and Children's Research Institute, Medical College of Wisconsin and Children's Hospital of Wisconsin, Milwaukee, WI, USA.
K F SchilterDepartment of Pediatrics and Children's Research Institute, Medical College of Wisconsin and Children's Hospital of Wisconsin, Milwaukee, WI, USA.
J A PhillipsDivision of Medical Genetics and Genomic Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
S SequeiraMetabolic Unit, Pediatric Department, Hospital de Dona Estefânia, CHLC, Lisbon, Portugal.
A SchinzelDepartment of Genetics, Institute of Medical Genetics, Schwerzenbach, Switzerland.
E V SeminaDepartment of Pediatrics and Children's Research Institute, Medical College of Wisconsin and Children's Hospital of Wisconsin, Milwaukee, WI, USA. esemina@mcw.edu.
Children's Hospital of Wisconsin · USMedical College of Wisconsin · USHospital de Dona Estefânia · PTMedical Genetics Center · DEVanderbilt University Medical Center · US

Funding

MORPHOLOGY MODULEP30EY001931 · NEI · MEDICAL COLLEGE OF WISCONSIN · PI LINK, BRIAN A · 1985 to 2016
$9.8M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR031973 · NCRR · MEDICAL COLLEGE OF WISCONSIN · PI SHAKER, REZA NONE · 2010 to 2011
$7.9M
Molecular Mechanisms of Axenfeld-Rieger SyndromeR01EY015518 · NEI · MEDICAL COLLEGE OF WISCONSIN · PI Elena V Semina · 2005 to 2026
$5.6M
Rresearch Training Program in Vision ScienceT32EY014537 · NEI · MEDICAL COLLEGE OF WISCONSIN · PI Elena V Semina · 2002 to 2026
$4.2M
NCRR NIH HHS UL1 RR031973NEI NIH HHS P30 EY001931NEI NIH HHS R01 EY015518NEI NIH HHS T32 EY014537
6 · The paper itself

Abstract

The genetic basis of congenital glaucoma with systemic anomalies is largely unknown. Whole exome sequencing (WES) in 10 probands with congenital glaucoma and variable systemic anomalies identified pathogenic or likely pathogenic variants in three probands; in two of these, a combination of two Mendelian disorders was found to completely explain the patients' features whereas in the third case only the ocular findings could be explained by the genetic diagnosis. The molecular diagnosis for glaucoma included two cases with compound heterozygous or homozygous pathogenic alleles in CYP1B1 and one family with a dominant pathogenic variant in FOXC1; the second genetic diagnosis for the additional systemic features included compound heterozygous mutations in NPHS1 in one family and a heterozygous 18q23 deletion in another pedigree. These findings show the power of WES in the analysis of complex conditions and emphasize the importance of CYP1B1 screening in patients with congenital glaucoma regardless of the presence/absence of other systemic anomalies.

Indexed as

AllelesCytochrome P-450 CYP1B1DNA Mutational AnalysisExomeFemaleForkhead Transcription FactorsGlaucomaHeterozygoteHumansInfantMaleMembrane ProteinsPedigreeSequence Analysis, DNACYP1B1 protein, humanCytochrome P-450 CYP1B1Forkhead Transcription FactorsFOXC1 protein, humanMembrane Proteinsnephrin18q23 deletioncongenital glaucomaCYP1B1exome sequencingFOXC1multiple diagnosesNPHS1

Identifiers

PMID27272408
PMCPMC5295561
OpenAlexW2411579504

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.