Evidence map›Paper›PMID 27271911›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2016

Quantitative Monitoring Spatiotemporal Activation of Ras and PKD1 Using Confocal Fluorescent Microscopy.

Xuehua Xu, Michelle Yun, Xi Wen, Joseph Brzostowski, Wei Quan, Q Jane Wang, Tian Jin

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Ras inhibitor CAPRI enables neutrophil-like cells to chemotax through a higher-concentration range of gradients.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. Membrane Targeting of C2GAP1 EnablesFrontiers in cell and developmental biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xuehua XuChemotaxis Signaling Section, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, NIH, 5601 Fishers Lane, MSC 9806, Rockville, MD, USA. xxu@niaid.nih.gov.
Michelle YunChemotaxis Signaling Section, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, NIH, 5601 Fishers Lane, MSC 9806, Rockville, MD, USA.
Xi WenChemotaxis Signaling Section, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, NIH, 5601 Fishers Lane, MSC 9806, Rockville, MD, USA.
Joseph BrzostowskiImaging Core Facility, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, NIH, Rockville, MD, USA.
Wei QuanChemotaxis Signaling Section, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, NIH, 5601 Fishers Lane, MSC 9806, Rockville, MD, USA.
Q Jane WangDepartment of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Tian JinLaboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, NIH, 5601 Fishers Lane, MSC 9806, Rockville, MD, USA.

Funding

The Mechanisms Involved in Chemotaxis of Immune and Cancer Cells ZIAAI001156 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI JIN, TIAN · 2011 to 2025
$8.6M
The role of PKD3 in prostate carcinogenesisR01CA129127 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WANG, QIMING JANE · 2009 to 2013
$1.5M
Development of small molecule inhibitors of protein kinase DR01CA142580 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WANG, QIMING JANE · 2010 to 2014
$1.5M
NCI NIH HHS R01 CA129127NCI NIH HHS R01 CA142580
6 · The paper itself

Abstract

Receptor activation upon ligand binding induces activation of multiple signaling pathways. To fully understand how these signaling pathways coordinate, it is essential to determine the dynamic nature of the spatiotemporal activation profile of signaling components at the level of single living cells. Here, we outline a detailed methodology for visualizing and quantitatively measuring the spatiotemporal activation of Ras and PKD1 by applying advanced fluorescence imaging techniques, including multichannel, simultaneous imaging and Förster resonance energy transfer (FRET).

Indexed as

Microscopy, ConfocalMolecular ImagingCell Line, TumorChemotactic FactorsEnzyme ActivationFluorescence Resonance Energy TransferGene ExpressionGenes, ReporterHL-60 CellsHumansPhosphorylationras ProteinsTRPP Cation ChannelsChemotactic Factorsras ProteinsTRPP Cation ChannelsConfocal fluorescence microscopyFörster resonance energy transfer (FRET)Phosphorylation of PKD1Protein kinase D 1 (PKD1)Ras activation

Identifiers

PMID27271911
PMCPMC5500199

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.