Evidence map›Paper›PMID 27271737›Full record

ArticleScientific reports2016

Peptide aromatic interactions modulated by fluorinated residues: Synthesis, structure and biological activity of Somatostatin analogs containing 3-(3',5'difluorophenyl)-alanine.

Pablo Martín-Gago, Álvaro Rol, Toni Todorovski, Eric Aragón, Pau Martin-Malpartida, Xavier Verdaguer, Mariona Vallès Miret, Jimena Fernández-Carneado, Berta Ponsati, Maria J Macias and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Conformational ensemble of the TNF-derived peptide solnatide in solution.Computational and structural biotechnology journal · 2022
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Pablo Martín-GagoInstitute for Research in Biomedicine (IRB Barcelona). The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, Barcelona 08028, Spain.
Álvaro RolInstitute for Research in Biomedicine (IRB Barcelona). The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, Barcelona 08028, Spain.
Toni TodorovskiInstitute for Research in Biomedicine (IRB Barcelona). The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, Barcelona 08028, Spain.
Eric AragónInstitute for Research in Biomedicine (IRB Barcelona). The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, Barcelona 08028, Spain.
Pau Martin-MalpartidaInstitute for Research in Biomedicine (IRB Barcelona). The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, Barcelona 08028, Spain.
Xavier VerdaguerInstitute for Research in Biomedicine (IRB Barcelona). The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, Barcelona 08028, Spain.
Mariona Vallès MiretBCN Peptides S.A. Pol. Ind. Els Vinyets-Els Fogars, Sector II. Ctra. Comarcal 244, Km. 22, 08777 Sant Quintí de Mediona, Barcelona 08777, Spain.
Jimena Fernández-CarneadoBCN Peptides S.A. Pol. Ind. Els Vinyets-Els Fogars, Sector II. Ctra. Comarcal 244, Km. 22, 08777 Sant Quintí de Mediona, Barcelona 08777, Spain.
Berta PonsatiBCN Peptides S.A. Pol. Ind. Els Vinyets-Els Fogars, Sector II. Ctra. Comarcal 244, Km. 22, 08777 Sant Quintí de Mediona, Barcelona 08777, Spain.
Maria J MaciasInstitute for Research in Biomedicine (IRB Barcelona). The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, Barcelona 08028, Spain.
Antoni RieraInstitute for Research in Biomedicine (IRB Barcelona). The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, Barcelona 08028, Spain.
Institute for Research in Biomedicine · ESUniversitat de Barcelona · ESInstitució Catalana de Recerca i Estudis Avançats · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Somatostatin is a 14-residue peptide hormone that regulates the endocrine system by binding to five G-protein-coupled receptors (SSTR1-5). We have designed six new Somatostatin analogs with L-3-(3',5'-difluorophenyl)-alanine (Dfp) as a substitute of Phe and studied the effect of an electron-poor aromatic ring in the network of aromatic interactions present in Somatostatin. Replacement of each of the Phe residues (positions 6, 7 and 11) by Dfp and use of a D-Trp8 yielded peptides whose main conformations could be characterized in aqueous solution by NMR. Receptor binding studies revealed that the analog with Dfp at position 7 displayed a remarkable affinity to SSTR2 and SSTR3. Analogs with Dfp at positions 6 or 11 displayed a π-π interaction with the Phe present at 11 or 6, respectively. Interestingly, these analogs, particularly [D-Trp8,L-Dfp11]-SRIF, showed high selectivity towards SSTR2, with a higher value than that of Octreotide and a similar one to that of native Somatostatin.

Indexed as

AlanineAmino Acid SequenceBinding SitesHalogenationMagnetic Resonance SpectroscopyModels, MolecularMolecular StructurePeptides, CyclicSomatostatinStructure-Activity RelationshipAlaninePeptides, CyclicSomatostatin

Identifiers

PMID27271737
PMCPMC4895178
OpenAlexW2416173352

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.