Evidence map›Paper›PMID 27271677›Full record

ArticleBiology2016

Abiotic Deposition of Fe Complexes onto Leptothrix Sheaths.

Tatsuki Kunoh, Hideki Hashimoto, Ian R McFarlane, Naoaki Hayashi, Tomoko Suzuki, Eisuke Taketa, Katsunori Tamura, Mikio Takano, Mohamed Y El-Naggar, Hitoshi Kunoh and 1 more

Abstract read
In one paragraph

Article in Biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Applied and environmental microbiology · 2024
    Article
  2. Frontiers in microbiology · 2021
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Tatsuki KunohCore Research for Evolutionary Science and Technology (CREST), Japan Science and Technology Agency (JST), Okayama 700-0082, Japan. tkunoh06@cc.okayama-u.ac.jp.
Hideki HashimotoCore Research for Evolutionary Science and Technology (CREST), Japan Science and Technology Agency (JST), Okayama 700-0082, Japan. hideki-h@cc.kogakuin.ac.jp.
Ian R McFarlaneDepartment of Physics and Astronomy, University of Southern California, Los Angeles, CA 90089, USA. ian.r.mcfarlane@gmail.com.
Naoaki HayashiCore Research for Evolutionary Science and Technology (CREST), Japan Science and Technology Agency (JST), Okayama 700-0082, Japan. hayashi@icems.kyoto-u.ac.jp.
Tomoko SuzukiCore Research for Evolutionary Science and Technology (CREST), Japan Science and Technology Agency (JST), Okayama 700-0082, Japan. suzukit@fc.jwu.ac.jp.
Eisuke TaketaCore Research for Evolutionary Science and Technology (CREST), Japan Science and Technology Agency (JST), Okayama 700-0082, Japan. en421232@s.okayama-u.ac.jp.
Katsunori TamuraCore Research for Evolutionary Science and Technology (CREST), Japan Science and Technology Agency (JST), Okayama 700-0082, Japan. ktamura@okayama-u.ac.jp.
Mikio TakanoCore Research for Evolutionary Science and Technology (CREST), Japan Science and Technology Agency (JST), Okayama 700-0082, Japan. takano@cc.okayama-u.ac.jp.
Mohamed Y El-NaggarDepartment of Physics and Astronomy, University of Southern California, Los Angeles, CA 90089, USA. mnaggar@usc.edu.
Hitoshi KunohCore Research for Evolutionary Science and Technology (CREST), Japan Science and Technology Agency (JST), Okayama 700-0082, Japan. hkunoh@cc.okayama-u.ac.jp.
Jun TakadaCore Research for Evolutionary Science and Technology (CREST), Japan Science and Technology Agency (JST), Okayama 700-0082, Japan. jtakada@cc.okayama-u.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria classified in species of the genus Leptothrix produce extracellular, microtubular, Fe-encrusted sheaths. The encrustation has been previously linked to bacterial Fe oxidases, which oxidize Fe(II) to Fe(III) and/or active groups of bacterial exopolymers within sheaths to attract and bind aqueous-phase inorganics. When L. cholodnii SP-6 cells were cultured in media amended with high Fe(II) concentrations, Fe(III) precipitates visibly formed immediately after addition of Fe(II) to the medium, suggesting prompt abiotic oxidation of Fe(II) to Fe(III). Intriguingly, these precipitates were deposited onto the sheath surface of bacterial cells as the population was actively growing. When Fe(III) was added to the medium, similar precipitates formed in the medium first and were abiotically deposited onto the sheath surfaces. The precipitates in the Fe(II) medium were composed of assemblies of globular, amorphous particles (ca. 50 nm diameter), while those in the Fe(III) medium were composed of large, aggregated particles (≥3 µm diameter) with a similar amorphous structure. These precipitates also adhered to cell-free sheaths. We thus concluded that direct abiotic deposition of Fe complexes onto the sheath surface occurs independently of cellular activity in liquid media containing Fe salts, although it remains unclear how this deposition is associated with the previously proposed mechanisms (oxidation enzyme- and/or active group of organic components-involved) of Fe encrustation of the Leptothrix sheaths.

Indexed as

abiotic oxidationdirect depositionFe(III) particlesLeptothrix cholodnii SP-6sheath

Identifiers

PMID27271677
PMCPMC4929540

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.