Evidence map›Paper›PMID 27271570›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2016

Transcriptional Profiling of Th2 Cells Identifies Pathogenic Features Associated with Asthma.

Grégory Seumois, Jose Zapardiel-Gonzalo, Brandie White, Divya Singh, Veronique Schulten, Myles Dillon, Denize Hinz, David H Broide, Alessandro Sette, Bjoern Peters and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed, 1 pooled it
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 1 synthesis or guideline pooled it, 91 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. The RNA-binding protein KSRP reduces asthma-like characteristics in a murine model.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Cytotoxic CD4Med (New York, N.Y.) · 2023
    Article
  15. Climate change and epigenetic biomarkers in allergic and airway diseases.The Journal of allergy and clinical immunology · 2023
    Review
  16. Review
  17. T helper 2 cells in asthma.The Journal of experimental medicine · 2023
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Grégory SeumoisLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037;ORCID 0000-0002-8164-6852
Jose Zapardiel-GonzaloLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037;ORCID 0000-0002-9098-1652
Brandie WhiteLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037;
Divya SinghLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037;ORCID 0000-0002-2961-735X
Veronique SchultenLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037;
Myles DillonLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037;
Denize HinzLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037;
David H BroideDivision of Rheumatology, Allergy, and Immunology, Department of Medicine, University of California, San Diego, La Jolla, CA 92093; and.
Alessandro SetteLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037;ORCID 0000-0001-7013-2250
Bjoern PetersLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037; vijay@lji.org bpeters@lji.org.
Pandurangan VijayanandLa Jolla Institute for Allergy and Immunology, La Jolla, CA 92037; Clinical and Experimental Sciences, National Institute for Health Research Southampton Respiratory Biomedical Research Unit, University of Southampton, Faculty of Medicine, Southampton SO16 6YD, United Kingdom vijay@lji.org bpeters@lji.org.
La Jolla Institute for Immunology · USUniversity of California San Diego · US

Funding

Epigenomics of T cells and innate immune cells in human asthmaR01HL114093 · NHLBI · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI ARSHAD, SYED HASAN, PETERS, BJOERN · 2011 to 2020
$8.5M
Understanding mechanisms in specific immunotherapy (SIT)U19AI100275 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI SETTE, ALESSANDRO · 2012 to 2017
$8.1M
FACSAria II Cell SorterS10RR027366 · NCRR · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI CROFT, MICHAEL · 2011 to 2011
$514k
NHLBI NIH HHS R01 HL114093NIAID NIH HHS U19 AI100275
6 · The paper itself

Abstract

Allergic asthma and rhinitis are two common chronic allergic diseases that affect the lungs and nose, respectively. Both diseases share clinical and pathological features characteristic of excessive allergen-induced type 2 inflammation, orchestrated by memory CD4(+) T cells that produce type 2 cytokines (Th2 cells). However, a large majority of subjects with allergic rhinitis do not develop asthma, suggesting divergence in disease mechanisms. Because Th2 cells play a pathogenic role in both these diseases and are also present in healthy nonallergic subjects, we performed global transcriptional profiling to determine whether there are qualitative differences in Th2 cells from subjects with allergic asthma, rhinitis, and healthy controls. Th2 cells from asthmatic subjects expressed higher levels of several genes that promote their survival as well as alter their metabolic pathways to favor persistence at sites of allergic inflammation. In addition, genes that enhanced Th2 polarization and Th2 cytokine production were also upregulated in asthma. Several genes that oppose T cell activation were downregulated in asthma, suggesting enhanced activation potential of Th2 cells from asthmatic subjects. Many novel genes with poorly defined functions were also differentially expressed in asthma. Thus, our transcriptomic analysis of circulating Th2 cells has identified several molecules that are likely to confer pathogenic features to Th2 cells that are either unique or common to both asthma and rhinitis.

Indexed as

AsthmaCell SeparationEnzyme-Linked Immunospot AssayGene Expression ProfilingGene Regulatory NetworksHumansLymphocyte ActivationPolymerase Chain ReactionRhinitis, AllergicTh2 CellsTranscriptome

Identifiers

PMID27271570
PMCPMC4936908
OpenAlexW2410622642

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.