Evidence map›Paper›PMID 27270140›Full record

ArticleScientific reports2016

Horizontal gene transfer events reshape the global landscape of arm race between viruses and homo sapiens.

Dong-Sheng Chen, Yi-Quan Wu, Wei Zhang, San-Jie Jiang, Shan-Ze Chen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  5. Article
  6. Review
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  9. Self-assembled Viral Nanoparticles as Targeted Anticancer Vehicles.Biotechnology and bioprocess engineering : BBE · 2021
    Review
  10. Article
  11. Review
  12. Genome Sequencing ofFrontiers in microbiology · 2019
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Dong-Sheng ChenDepartment of Genetics, University of Cambridge, Cambridge, CB2 3EH, UK.
Yi-Quan WuMax von Pettenkofer-Institute for Virology, Ludwig-Maximilians-University Munich, 80336 Munich, Germany.
Wei ZhangResearch unit gene vector, Helmholtz Zentrum, 81377 Munich, Germany.
San-Jie JiangDepartment of Plant Sciences, University of Cambridge, Cambridge, CB2 3EA, UK.
Shan-Ze ChenDepartment of Pathophysiology, West China School of Preclinical Sciences and Forensic Medicine, Sichuan University, 610041 Chengdu, Sichuan Province, China.
University of Cambridge · GBHelmholtz Zentrum München · DELudwig-Maximilians-Universität München · DESichuan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Horizontal gene transfer (HGT) drives the evolution of recipient organism particularly if it provides a novel function which enhances the fitness or its adaption to the environment. Virus-host co-evolution is attractive for studying co-evolutionary processes, since viruses strictly replicate inside of the host cells and thus their evolution is inexorably tangled with host biology. HGT, as a mechanism of co-evolution between human and viruses, has been widely documented, however, the roles HGT play during the interaction between human and viruses are still in their infancy. In this study, we performed a comprehensive analysis on the genes horizontally transferred between viruses and their corresponding human hosts. Our study suggests that the HGT genes in human are predominantly enriched in immune related GO terms while viral HGT genes are tend to be encoded by viruses which promote the invasion of immune system of hosts. Based on our results, it gives us a hint about the evolution trajectory of HGT events. Overall, our study suggests that the HGT between human and viruses are highly relevant to immune interaction and probably reshaped the arm race between hosts and viruses.

Indexed as

Evolution, MolecularGene Transfer, HorizontalAmino Acid SequenceChemokinesConserved SequenceGene OntologyGenes, ViralHost-Pathogen InteractionsHuman GeneticsHumansPhylogenyReceptors, ChemokineVirusesChemokinesReceptors, Chemokine

Identifiers

PMID27270140
PMCPMC4895215
OpenAlexW2415394971

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.