Evidence map›Paper›PMID 27270004›Full record

ArticleNano letters2016

Single-Molecule Reaction Chemistry in Patterned Nanowells.

Delphine Bouilly, Jason Hon, Nathan S Daly, Scott Trocchia, Sefi Vernick, Jaeeun Yu, Steven Warren, Ying Wu, Ruben L Gonzalez, Kenneth L Shepard and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nano letters, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 47 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Delphine BouillyDepartment of Chemistry, Columbia University , 3000 Broadway, New York, New York 10027 United States.
Jason HonDepartment of Chemistry, Columbia University , 3000 Broadway, New York, New York 10027 United States.
Nathan S DalyDepartment of Chemistry, Columbia University , 3000 Broadway, New York, New York 10027 United States.
Scott TrocchiaDepartment of Electrical Engineering, Columbia University , 500 W. 120th Street, New York, New York 10027 United States.
Sefi VernickDepartment of Electrical Engineering, Columbia University , 500 W. 120th Street, New York, New York 10027 United States.
Jaeeun YuDepartment of Chemistry, Columbia University , 3000 Broadway, New York, New York 10027 United States.
Steven WarrenDepartment of Electrical Engineering, Columbia University , 500 W. 120th Street, New York, New York 10027 United States.
Ying WuDepartment of Chemistry, Columbia University , 3000 Broadway, New York, New York 10027 United States.
Ruben L GonzalezDepartment of Chemistry, Columbia University , 3000 Broadway, New York, New York 10027 United States.
Kenneth L ShepardDepartment of Electrical Engineering, Columbia University , 500 W. 120th Street, New York, New York 10027 United States.
Colin NuckollsDepartment of Chemistry, Columbia University , 3000 Broadway, New York, New York 10027 United States.
Columbia University · US

Funding

Translational CoreU19AI109761 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SHEPARD, KENNETH L · 2014 to 2018
$32.6M
Studies of Riboswitch-Mediated Transcriptional Control Using Single-Molecule FielR01GM107417 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI GONZALEZ, RUBEN L, NUCKOLLS, COLIN P · 2014 to 2017
$1.5M
NIAID NIH HHS U19 AI109761NIGMS NIH HHS R01 GM107417
6 · The paper itself

Abstract

A new approach to synthetic chemistry is performed in ultraminiaturized, nanofabricated reaction chambers. Using lithographically defined nanowells, we achieve single-point covalent chemistry on hundreds of individual carbon nanotube transistors, providing robust statistics and unprecedented spatial resolution in adduct position. Each device acts as a sensor to detect, in real-time and through quantized changes in conductance, single-point functionalization of the nanotube as well as consecutive chemical reactions, molecular interactions, and molecular conformational changes occurring on the resulting single-molecule probe. In particular, we use a set of sequential bioconjugation reactions to tether a single-strand of DNA to the device and record its repeated, reversible folding into a G-quadruplex structure. The stable covalent tether allows us to measure the same molecule in different solutions, revealing the characteristic increased stability of the G-quadruplex structure in the presence of potassium ions (K(+)) versus sodium ions (Na(+)). Nanowell-confined reaction chemistry on carbon nanotube devices offers a versatile method to isolate and monitor individual molecules during successive chemical reactions over an extended period of time.

Indexed as

G-QuadruplexesNanotubes, CarbonDNAIonsNucleic Acid ConformationDNAIonsNanotubes, Carbonbiofunctionalizationcarbon nanotubeselectrical conductanceelectronic devicessensorsSingle-molecule

Identifiers

PMID27270004
PMCPMC5176326
OpenAlexW2417966972

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.