Evidence map›Paper›PMID 27265867›Full record

ArticleDevelopmental biology2016

Function of the C. elegans T-box factor TBX-2 depends on interaction with the UNC-37/Groucho corepressor.

Paul Huber, Tanya Crum, Peter G Okkema

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Paul HuberDepartment of Biological Sciences, Molecular, Cellular & Developmental Biology Research Group, University of Illinois at Chicago, Chicago, IL, USA.
Tanya CrumDepartment of Biological Sciences, Molecular, Cellular & Developmental Biology Research Group, University of Illinois at Chicago, Chicago, IL, USA.
Peter G OkkemaDepartment of Biological Sciences, Molecular, Cellular & Developmental Biology Research Group, University of Illinois at Chicago, Chicago, IL, USA. Electronic address: okkema@uic.edu.
University of Illinois Chicago · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Function and regulation of T-box factors in C. elegansR01GM082865 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI OKKEMA, PETER G · 2007 to 2010
$1.3M
NIGMS NIH HHS R01 GM082865NIH HHS P40 OD010440
6 · The paper itself

Abstract

T-box transcription factors are important regulators of development in all animals, and altered expression of T-box factors has been identified in an increasing number of diseases and cancers. Despite these important roles, the mechanism of T-box factor activity is not well understood. We have previously shown that the Caenorhabditis elegans Tbx2 subfamily member TBX-2 functions as a transcriptional repressor to specify ABa-derived pharyngeal muscle, and that this function depends on SUMOylation. Here we show that TBX-2 function also depends on interaction with the Groucho-family corepressor UNC-37. TBX-2 interacts with UNC-37 in yeast two-hybrid assays via a highly conserved engrailed homology 1 (eh1) motif located near the TBX-2 C-terminus. Reducing unc-37 phenocopies tbx-2 mutants, resulting in a specific loss of anterior ABa-derived pharyngeal muscles and derepression of the tbx-2 promoter. Moreover, double mutants containing hypomorphic alleles of unc-37 and tbx-2 exhibit enhanced phenotypes, providing strong genetic evidence that unc-37 and tbx-2 share common functions in vivo. To test whether interaction with UNC-37 is necessary for TBX-2 activity, we developed a transgene rescue assay using a tbx-2 containing fosmid and found that mutating the tbx-2 eh1 motif reduced rescue of a tbx-2 null mutant. These results indicate that TBX-2 function in vivo depends on interaction with UNC-37. As many T-box factors contain eh1 motifs, we suggest that interaction with Groucho-family corepressors is a common mechanism contributing to their activity.

Indexed as

Amino Acid SequenceAnimalsBranchial RegionCaenorhabditis elegansCaenorhabditis elegans ProteinsConserved SequenceGene Knockdown TechniquesMutationRepressor ProteinsTranscription FactorsCaenorhabditis elegans ProteinsRepressor ProteinsTBX-2 protein, C elegansTranscription Factorsunc-37 protein, C elegansGro/TLEGrouchoPharyngeal muscleT-boxTranscriptional repression

Identifiers

PMID27265867
PMCPMC4961519
OpenAlexW2419555600

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.