Evidence map›Paper›PMID 27260214›Full record

ReviewCurrent genetics2017

Are all repeats created equal? Understanding DNA repeats at an individual level.

Jinpu Yang, Fei Li

Abstract readReview
In one paragraph

Review in Current genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. The dynamic centromere.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Review
  3. Review
  4. Rex1BD and the 14-3-3 protein control heterochromatin organization at tandem repeats by linking RNAi and HDAC.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Cell cycle control of kinetochore assembly.Nucleus (Austin, Tex.) · 2022
    Review
  6. Three-dimensional genome organization via triplex-forming RNAs.Nature structural & molecular biology · 2021
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. In Situ Chromatin-Binding Assay Using Epifluorescent Microscopy in S. pombe.Methods in molecular biology (Clifton, N.J.) · 2018
    Review
  14. Coordinated regulation of heterochromatin inheritance by Dpb3-Dpb4 complex.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jinpu YangDepartment of Biology, New York University, New York, NY, 10003, USA.
Fei LiDepartment of Biology, New York University, New York, NY, 10003, USA. fl43@nyu.edu.ORCID http://orcid.org/0000-0002-1206-9684

Funding

Molecular Basis of Centromere Specification and InheritanceR01GM106037 · NIGMS · NEW YORK UNIVERSITY · PI LI, FEI · 2014 to 2018
$1.5M
NIGMS NIH HHS R01 GM106037
6 · The paper itself

Abstract

Repetitive DNA sequences, comprising up to 50 % of the genome in all eukaryotes, play important roles in a wide range of cellular functions, such as transcriptional regulation, genome stability, and cellular differentiation. However, due to technical difficulties in differentiating their sequences, DNA repeats remain one of the most mysterious parts of eukaryotic genomes. Key questions, such as how repetitive entities behave at individual level and how the internal architecture of these repeats is organized, are still poorly understood. Recent advances from our group reveal unexpected position-dependent variation within tandem DNA repeats in fission yeast. Despite sharing identical DNA sequences, the peri-centromeric repeats are organized into diverse epigenetic states and chromatin structures. We demonstrate that this position-dependent variation requires key heterochromatin factors and condensin. Our works further suggest that the peri-centromeric repeats are organized into distinct higher order structures that ensure a proper positioning of CENP-A, the centromere-specific histone H3 variant, to centromeres. These most recent developments offer insights into the mechanisms underlying the position effect within tandem DNA arrays, and have broad implications in the field of epigenetics and chromatin biology.

Indexed as

Repetitive Sequences, Nucleic AcidCentromereChromatinChromosomal Position EffectsDNAEpigenesis, GeneticGene Expression Regulation, FungalGenetic VariationTandem Repeat SequencesYeastsChromatinDNACENP-ACentromere positioningDNA repeatsEpigeneticsFission yeast Schizosaccharomyces pombeHeterochromatinPosition effect

Identifiers

PMID27260214
PMCPMC5136337

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.