Evidence map›Paper›PMID 27259867›Full record

ArticleJournal of medical microbiology2016

Genetic environment of the KPC gene in Acinetobacter baumannii ST2 clone from Puerto Rico and genomic insights into its drug resistance.

Teresa Martinez, Idali Martinez, Guillermo J Vazquez, Edna E Aquino, Iraida E Robledo

Abstract read
In one paragraph

Article in Journal of medical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Outsmarting Nightmare: Drug Resistance inThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2025
    Review
  3. Article
  4. Carbapenem Resistance inBioMed research international · 2024
    Article
  5. Associations betweenMedicina (Kaunas, Lithuania) · 2023
    Article
  6. CRISPR-Based Gene Editing inPharmaceuticals (Basel, Switzerland) · 2023
    Review
  7. Pathogens (Basel, Switzerland) · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Insights intoAntibiotics (Basel, Switzerland) · 2020
    Review
  14. Overexpression ofBioMed research international · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Teresa MartinezDepartment of Microbiology and Medical Zoology, School of Medicine, University of Puerto Rico, GPO Box 365067, San Juan, Puerto Rico.
Idali MartinezDepartment of Microbiology and Medical Zoology, School of Medicine, University of Puerto Rico, GPO Box 365067, San Juan, Puerto Rico.
Guillermo J VazquezDepartment of Microbiology and Medical Zoology, School of Medicine, University of Puerto Rico, GPO Box 365067, San Juan, Puerto Rico.
Edna E AquinoDepartment of Microbiology and Medical Zoology, School of Medicine, University of Puerto Rico, GPO Box 365067, San Juan, Puerto Rico.
Iraida E RobledoDepartment of Microbiology and Medical Zoology, School of Medicine, University of Puerto Rico, GPO Box 365067, San Juan, Puerto Rico.
University of Puerto Rico, Medical Sciences Campus · PR

Funding

RISE Option III: MBRS RISE at the UPR Medical Sciences CampusR25GM061838 · NIGMS · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI CADILLA, CARMEN LYDIA · 2000 to 2021
$25.5M
TRANSLATIONAL PROTEOMICS CENTERG12MD007600 · NIMHD · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI FERNANDEZ-REPOLLET, EMMA · 2012 to 2016
$11.0M
Bioinformatics Programs at Minority InstitutionsT36GM095335 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI ROPELEWSKI, ALEXANDER J · 2011 to 2015
$3.2M
NIGMS NIH HHS R25 GM061838NIGMS NIH HHS T36 GM095335NIMHD NIH HHS G12 MD007600
6 · The paper itself

Abstract

Carbapenems are considered the last-resort antibiotics to treat infections caused by multidrug-resistant Gram-negative bacilli. The Klebsiella pneumoniae carbapenemase (KPC) enzyme hydrolyses β-lactam antibiotics including the carbapenems. KPC has been detected worldwide in Enterobacteriaceae and Pseudomonas aeruginosa isolates associated with transposon Tn4401 commonly located in plasmids. Acinetobacter baumannii has become an important multidrug-resistant nosocomial pathogen. KPC-producing A. baumannii has been reported to date only in Puerto Rico. The objective of this study was to determine the whole genomic sequence of a KPC-producing A. baumannii in order to (i) define its allelic diversity, (ii) identify the location and genetic environment of the blaKPC and (iii) detect additional mechanisms of antimicrobial resistance. Next-generation sequencing, Southern blot, PFGE, multilocus sequence typing and bioinformatics analysis were performed. The organism was assigned to the international ST2 clone. The blaKPC-2 was identified on a novel truncated version of Tn4401e (tentatively named Tn4401h), located in the chromosome within an IncA/C plasmid fragment derived from an Enterobacteriaceae, probably owing to insertion sequence IS26. A chromosomally located truncated Tn1 transposon harbouring a blaTEM-1 was found in a novel genetic environment within an antimicrobial resistance cluster. Additional resistance mechanisms included efflux pumps, non-β-lactam antibiotic inactivating enzymes within and outside a resistance island, two class 1 integrons, In439 and the novel In1252, as well as mutations in the topoisomerase and DNA gyrase genes which confer resistance to quinolones. The presence of the blaKPC in an already globally disseminated A. baumannii ST2 presents a serious threat of further dissemination.

Indexed as

Drug Resistance, BacterialGenotypeAcinetobacter baumanniiAcinetobacter InfectionsAgedAged, 80 and overAnimalsBacterial Proteinsbeta-LactamasesCross InfectionDNA Transposable ElementsFemaleGene OrderGenes, BacterialGenome, BacterialHumansBacterial Proteinsbeta-LactamasescarbapenemaseDNA Transposable Elements

Identifiers

PMID27259867
PMCPMC5756493
OpenAlexW2418078495

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.