Evidence map›Paper›PMID 27259712›Full record

Observational studyEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2016

Spread of carbapenem-resistant international clones of Acinetobacter baumannii in Turkey and Azerbaijan: a collaborative study.

S S Ahmed, E Alp, A Ulu-Kilic, G Dinc, Z Aktas, B Ada, F Bagirova, I Baran, Y Ersoy, S Esen and 9 more

Abstract readObservational Study
PubMed Publisher
In one paragraph

Observational study in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Characterization of aFrontiers in cellular and infection microbiology · 2024
    Article
  7. Does Emerging Carbapenem Resistance inInfectious disease reports · 2023
    Review
  8. Molecular epidemiology of carbapenem-resistantNorthern clinics of Istanbul · 2023
    Review
  9. Article
  10. Article
  11. Risk factors for the first episode ofJournal of medical microbiology · 2020
    Observational
  12. Antibiotic resistance pattern ofIranian journal of microbiology · 2019
    Article
  13. Antibiotic resistance of Escherichia coli isolated from uncomplicated UTI in general practice patients over a 10-year period.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2019
    Article
  14. Review
  15. Article
  16. Review
  17. Insight intoInfection and drug resistance · 2018
    Review
  18. Characterization and Testing the Efficiency ofFrontiers in microbiology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

S S AhmedFaculty of Infectious Diseases, Erciyes University, Kayseri, Turkey. biosheffield@gmail.com.
E AlpFaculty of Infectious Diseases, Erciyes University, Kayseri, Turkey.
A Ulu-KilicFaculty of Infectious Diseases, Erciyes University, Kayseri, Turkey.
G DincFaculty of Infectious Diseases, Erciyes University, Kayseri, Turkey.
Z AktasDep. of Infectious Diseases, Faculty of Medicine, Istanbul University, Istanbul, Turkey.
B AdaDep. Infectious Diseases, Faculty of Medicine, Ege Univerisity, Izmir, Turkey.
F BagirovaDep. of Infectious Diseases, Faculty of Medicine, Azerbaijan Medical University, Baku, Azerbaijan.
I BaranDep. of Infectious Diseases, Faculty of Medicine, Ankara teaching hospital, Ankara, Turkey.
Y ErsoyDep. of Infectious Diseases, Faculty of Medicine, Inonu University, Malatya, Turkey.
S EsenDep. of Infectious Diseases, Faculty of Medicine, Ondokuz Mayis University, Samsun, Turkey.
T G GuvenDep. of Infectious Diseases, Faculty of Medicine, Cokurva University, Adana, Turkey.
J HopmanDep. of Medical Microbiology, Radboud UMC, Nijmegen, Netherlands.
S HosogluDep. of Infectious Diseases, Faculty of Medicine, Trabzon Teaching hospital, Trabzon, Turkey.
F KoksalDep. of Infectious Diseases, Faculty of Medicine, Cokurva University, Adana, Turkey.
E ParlakDep. of Infectious Diseases, Faculty of Medicine, Ataturk University, Erzurum, Turkey.
A N YalcinDep. of Infectious Diseases, Faculty of Medicine, Akdeniz University, Antalya, Turkey.
G YilmazDep. of Infectious Diseases, Faculty of Medicine, Karadeniz Technical University, Trabzon, Turkey.
A VossDep. of Medical Microbiology, Radboud UMC, Nijmegen, Netherlands.
W MelchersDep. of Medical Microbiology, Radboud UMC, Nijmegen, Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epidemic clones of Acinetobacter baumannii, described as European clones I, II, and III, are associated with hospital epidemics throughout the world. We aimed to determine the molecular characteristics and genetic diversity between European clones I, II, and III from Turkey and Azerbaijan. In this study, a total of 112 bloodstream isolates of carbapenem-resistant Acinetobacter spp. were collected from 11 hospitals across Turkey and Azerbaijan. The identification of Acinetobacter spp. using conventional and sensitivity tests was performed by standard criteria. Multiplex polymerase chain reaction (PCR) was used to detect OXA carbapenemase-encoding genes (bla OXA-23-like, bla OXA-24-like, bla OXA-51-like, and bla OXA-58-like). Pulsed-field gel electrophoresis (PFGE) typing was used to investigate genetic diversity. The bla OXA-51-like gene was present in all 112 isolates, 75 (67 %) carried bla OXA-23-like, 7 (6.2 %) carried bla OXA-58-like genes, and 5 (4.5 %) carried bla OXA-24-like genes. With a 90 % similarity cut-off value, 15 clones and eight unique isolates were identified. The largest clone was cluster D, with six subtypes. Isolates from clusters D and I were widely spread in seven different geographical regions throughout Turkey. However, F cluster was found in the northern and eastern regions of Turkey. EU clone I was grouped within J cluster with three isolates found in Antalya, Istanbul, and Erzurum. EU clone II was grouped in the U cluster with 15 isolates and found in Kayseri and Diyarbakır. The bla OXA-24-like gene in carbapenemases was identified rarely in Turkey and has been reported for the first time from Azerbaijan. Furthermore, this is the first multicenter study in Turkey and Azerbaijan to identify several major clusters belonging to European clones I and II of A. baumannii.

Indexed as

beta-Lactam ResistanceAcinetobacter baumanniiAcinetobacter InfectionsAnti-Bacterial AgentsAzerbaijanbeta-LactamasesCarbapenemsCluster AnalysisCross InfectionElectrophoresis, Gel, Pulsed-FieldGenetic VariationGenotypeHospitalsHumansMicrobial Sensitivity TestsMolecular EpidemiologyAnti-Bacterial Agentsbeta-LactamasesCarbapenems

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.