Evidence map›Paper›PMID 27258147›Full record

ArticlePloS one2016

Identification of New Mutations at the PCNA Subunit Interface that Block Translesion Synthesis.

Christine M Kondratick, Elizabeth M Boehm, Lynne M Dieckman, Kyle T Powers, Julio C Sanchez, Samuel R Mueting, M Todd Washington

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Christine M KondratickDepartment of Biochemistry, Carver College of Medicine, University of Iowa, Iowa City, Iowa, 52242, United States of America.
Elizabeth M BoehmDepartment of Biochemistry, Carver College of Medicine, University of Iowa, Iowa City, Iowa, 52242, United States of America.
Lynne M DieckmanDepartment of Chemistry, Creighton University, Omaha, Nebraska, 68178, United States of America.
Kyle T PowersDepartment of Biochemistry, Carver College of Medicine, University of Iowa, Iowa City, Iowa, 52242, United States of America.
Julio C SanchezDepartment of Biochemistry, Carver College of Medicine, University of Iowa, Iowa City, Iowa, 52242, United States of America.
Samuel R MuetingDepartment of Biochemistry, Carver College of Medicine, University of Iowa, Iowa City, Iowa, 52242, United States of America.
M Todd WashingtonDepartment of Biochemistry, Carver College of Medicine, University of Iowa, Iowa City, Iowa, 52242, United States of America.
University of Iowa · USCreighton University · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Douglas Robert Spitz · 2000 to 2026
$70.0M
Mechanisms of Damaged DNA Replication in EukaryotesR01GM081433 · NIGMS · UNIVERSITY OF IOWA · PI WASHINGTON, M. TODD · 2008 to 2021
$4.2M
SUMOylation and ubiquitylation of PCNA in recombination and translesion synthesisR01GM108027 · NIGMS · UNIVERSITY OF IOWA · PI WASHINGTON, M. TODD · 2013 to 2016
$1.4M
NIGMS NIH HHS R01 GM081433NIGMS NIH HHS R01 GM108027
6 · The paper itself

Abstract

Proliferating cell nuclear antigen (PCNA) plays an essential role in DNA replication and repair by interacting with a large number of proteins involved in these processes. Two amino acid substitutions in PCNA, both located at the subunit interface, have previously been shown to block translesion synthesis (TLS), a pathway for bypassing DNA damage during replication. To better understand the role of the subunit interface in TLS, we used random mutagenesis to generate a set of 33 PCNA mutants with substitutions at the subunit interface. We assayed the full set of mutants for viability and sensitivity to ultraviolet (UV) radiation. We then selected a subset of 17 mutants and measured their rates of cell growth, spontaneous mutagenesis, and UV-induced mutagenesis. All except three of these 17 mutants were partially or completely defective in induced mutagenesis, which indicates a partial or complete loss of TLS. These results demonstrate that the integrity of the subunit interface of PCNA is essential for efficient TLS and that even conservative substitutions have the potential to disrupt this process.

Indexed as

DNA DamageDNA ReplicationMutagenesisMutationProliferating Cell Nuclear AntigenProtein BindingProtein Structure, SecondarySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUltraviolet RaysProliferating Cell Nuclear AntigenSaccharomyces cerevisiae Proteins

Identifiers

PMID27258147
PMCPMC4892588
OpenAlexW2416014855

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.