ArticleNature plants2016
Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida.
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Article in Nature plants, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 207 papers.
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207citing papers in PubMed
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207 citing papers in PubMed.
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- A high-quality chromosome-level genome assembly of apple of Peru (Nicandra physalodes).Scientific data · 2026Article
- Full-length transcriptome sequencing analysis and characterization of MADS-box genes in Rhododendron fortunei.BMC plant biology · 2026Article
- Comparative centromere genomics reveals evolutionary divergence in Solanaceae genomes.Genome biology · 2026Article
- Targeted Gene Modification ofInternational journal of molecular sciences · 2026Article
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- Genetic diversity and evolution of endogenous pararetroviruses acrossFrontiers in plant science · 2026Article
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- Unveiling thePlants (Basel, Switzerland) · 2025Article
- CanGenes · 2025Article
- Chromosome-level genome assembly and annotation of Petunia hybrida.Scientific data · 2025Article
- Molecular mechanisms and genetic regulation of self-incompatibility in flowering plants: implications for crop improvement and evolutionary biology.Plant molecular biology · 2025Review
- The GenusPlants (Basel, Switzerland) · 2025Article
- PhWRKY30 activates salicylic acid biosynthesis to positively regulate antiviral defense response in petunia.Horticulture research · 2025Article
- AnPlants (Basel, Switzerland) · 2025Article
- Unraveling the Hormonal and Molecular Mechanisms Shaping Fruit Morphology in Plants.Plants (Basel, Switzerland) · 2025Review
147 more citing papers are in PubMed but not listed here.
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57 authors.
Aureliano BombarelyDepartment of Horticulture, Virginia Polytechnic Institute and State University, 490 West Campus Dr., Blacksburg, Virginia 24061, USA.
Michel MoserInstitute of Plant Sciences, University of Bern, Altenbergrain 21, 3013 Bern, Switzerland.
Avichai AmradInstitute of Plant Sciences, University of Bern, Altenbergrain 21, 3013 Bern, Switzerland.
Manzhu BaoHuazhong Agricultural University, Wuhan 430070, P. R. China.
Laure BapaumeDepartment of Biology, University of Fribourg, Fribourg, Switzerland, 6 Rte Albert Gockel, CH-1700 Fribourg, Switzerland.
Cornelius S BarryDepartment of Horticulture, Michigan State University, East Lansing, Michigan 48824, USA.
Mattijs BliekDepartment of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
Maaike R BoersmaDepartment of Plant Physiology, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
Lorenzo BorghiInstitute of Plant and Microbiology, University of Zürich, Zollikerstr. 107, CH-8008 Zürich, Switzerland.
Rémy BruggmannInterfaculty Bioinformatics Unit, University of Bern, Baltzerstrasse 6, CH-3012 Bern, Switzerland.
Marcel BucherCologne Biocenter, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Zuelpicher Straße 47b, 50674 Cologne, Germany.
Nunzio D'AgostinoConsiglio per la Ricerca in Agricoltura e l'analisi dell'economia agraria, Centro di Ricerca per l'Orticoltura (CREA-ORT), via Cavalleggeri 25, 84098 Pontecagnano (Sa) Italy.
Kevin DaviesDepartment of Breeding and Genomics, Plant and Food Research, Auckland, 120 Mt Albert Road, Mount Albert, Sandringham 1142, New Zealand.ORCID 0000-0001-5652-5015
Uwe DruegeDepartment of Plant Propagation, Leibniz Institute of Vegetable and Ornamental Crops (IGZ), Kühnhäuserstr. 101, 99090 Erfurt, Germany.
Natalia DudarevaDepartment of Biochemistry, Purdue University, West Lafayette, Indiana 47907-2063, USA.
Marcos Egea-CortinesInstituto de Biotecnología Vegetal, Universidad Politécnica de Cartagena, 30202, Cartagena, Spain.ORCID 0000-0003-4693-9948
Massimo DelledonneDipartimento di Biotecnologie, Universita degli Studi di Verona, Strada le Grazie 15, 37134 Verona, Italy.
Noe Fernandez-PozoBoyce Thompson Institute for Plant Research, 533 Tower Rd, Ithaca, New York 14853, USA.
Philipp FrankenDepartment of Plant Propagation, Leibniz Institute of Vegetable and Ornamental Crops (IGZ), Kühnhäuserstr. 101, 99090 Erfurt, Germany.ORCID 0000-0001-5710-4538
Laurie GrandontBiosystematics Group, Wageningen University and Research Center, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands.
J S Heslop-HarrisonDepartment of Genetics, University of Leicester, University Road, Leicester LE1 7RH, UK.
Jennifer HintzscheDepartment of Biological Sciences, Northern Illinois University, DeKalb, Illinois 60115, USA.
Mitrick JohnsDepartment of Biological Sciences, Northern Illinois University, DeKalb, Illinois 60115, USA.
Ronald KoesDepartment of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
Xiaodan LvBeijing Genomics Institute, Shenzhen 518083, China.
Eric LyonsSchool of Plant Sciences, iPlant Collaborative, University of Arizona, Tucson, Arizona 85721, USA.
Diwa MallaDepartment of Biological Sciences, Northern Illinois University, DeKalb, Illinois 60115, USA.
Enrico MartinoiaInstitute of Plant and Microbiology, University of Zürich, Zollikerstr. 107, CH-8008 Zürich, Switzerland.
Neil S MattsonSchool of Integrative Plant Science, Cornell University, Cornell University, Ithaca, New York 14853, USA.
Patrice MorelLaboratoire Reproduction et Développement des Plantes (RDP), ENS de Lyon/CNRS/INRA/UCBL, 46 Allée d'Italie, 69364 Lyon, France.ORCID 0000-0003-1690-8032
Lukas A MuellerBoyce Thompson Institute for Plant Research, 533 Tower Rd, Ithaca, New York 14853, USA.
Joëlle MuhlemannDepartment of Biochemistry, Purdue University, West Lafayette, Indiana 47907-2063, USA.
Eva NouriDepartment of Biology, University of Fribourg, Fribourg, Switzerland, 4 Rte Albert Gockel, CH-1700 Fribourg, Switzerland.
Valentina PasseriDepartment of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
Mario PezzottiDipartimento di Biotecnologie, Universita degli Studi di Verona, Strada le Grazie 15, 37134 Verona, Italy.
Qinzhou QiDepartment of Biological Sciences, Northern Illinois University, DeKalb, Illinois 60115, USA.
Didier ReinhardtDepartment of Biology, University of Fribourg, Fribourg, Switzerland, 3 Rte Albert Gockel, CH-1700 Fribourg, Switzerland.ORCID 0000-0003-3495-6783
Melanie RichDepartment of Biology, University of Fribourg, Fribourg, Switzerland, 5 Rte Albert Gockel, CH-1700 Fribourg, Switzerland.ORCID 0000-0001-6109-1290
Katja R Richert-PöggelerInstitute for Epidemiology and Pathogen Diagnostics, Julius Kühn-Institut (JKI), Federal Research Centre for Cultivated Plants, Messeweg 11-12, 38104 Braunschweig, Germany.
Tim P RobbinsDepartment of Crop and Plant Sciences, University of Nottingham, Sutton Bonington, Leicestershire, UL LE12 5RD, UK.
Michael C SchatzCold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, New York 11724, USA.
M Eric SchranzBiosystematics Group, Wageningen University and Research Center, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands.ORCID 0000-0001-6777-6565
Robert C SchuurinkDepartment of Plant Physiology, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
Trude SchwarzacherDepartment of Genetics, University of Leicester, University Road, Leicester LE1 7RH, UK.
Kees SpeltDepartment of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
Haibao TangSchool of Plant Sciences, iPlant Collaborative, University of Arizona, Tucson, Arizona 85721, USA.ORCID 0000-0002-3460-8570
Susan L UrbanusDepartment of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
Michiel VandenbusscheLaboratoire Reproduction et Développement des Plantes (RDP), ENS de Lyon/CNRS/INRA/UCBL, 46 Allée d'Italie, 69364 Lyon, France.
Kitty VijverbergRadboud University, FNWI, IWWR, Heyendaalseweg 135, 6525AJ Nijmegen, The Netherlands.
Gonzalo H VillarinoSchool of Integrative Plant Science, Cornell University, Cornell University, Ithaca, New York 14853, USA.
Ryan M WarnerDepartment of Horticulture, Michigan State University, East Lansing, Michigan 48824, USA.
Julia WeissInstituto de Biotecnología Vegetal, Universidad Politécnica de Cartagena, 30202, Cartagena, Spain.
Zhen YueBeijing Genomics Institute, Shenzhen 518083, China.
Jan ZethofRadboud University, FNWI, IWWR, Heyendaalseweg 135, 6525AJ Nijmegen, The Netherlands.
Francesca QuattrocchioDepartment of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
Thomas L SimsDepartment of Biological Sciences, Northern Illinois University, DeKalb, Illinois 60115, USA.
Cris KuhlemeierInstitute of Plant Sciences, University of Bern, Altenbergrain 21, 3013 Bern, Switzerland.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Petunia hybrida is a popular bedding plant that has a long history as a genetic model system. We report the whole-genome sequencing and assembly of inbred derivatives of its two wild parents, P. axillaris N and P. inflata S6. The assemblies include 91.3% and 90.2% coverage of their diploid genomes (1.4 Gb; 2n = 14) containing 32,928 and 36,697 protein-coding genes, respectively. The genomes reveal that the Petunia lineage has experienced at least two rounds of hexaploidization: the older gamma event, which is shared with most Eudicots, and a more recent Solanaceae event that is shared with tomato and other solanaceous species. Transcription factors involved in the shift from bee to moth pollination reside in particularly dynamic regions of the genome, which may have been key to the remarkable diversity of floral colour patterns and pollination systems. The high-quality genome sequences will enhance the value of Petunia as a model system for research on unique biological phenomena such as small RNAs, symbiosis, self-incompatibility and circadian rhythms.
Indexed as
Evolution, MolecularGenome, PlantHybridization, GeneticPetuniaPolyploidy
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