Evidence map›Paper›PMID 27253528›Full record

ArticlePloS one2016

Cyclical DNA Methylation and Histone Changes Are Induced by LPS to Activate COX-2 in Human Intestinal Epithelial Cells.

Tiziana Angrisano, Raffaela Pero, Mariarita Brancaccio, Lorena Coretti, Ermanno Florio, Antonio Pezone, Viola Calabrò, Geppino Falco, Simona Keller, Francesca Lembo and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

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  14. Urinary Biomarkers: Diagnostic Tools for Monitoring Athletes' Health Status.International journal of environmental research and public health · 2020
    Article
  15. Article
  16. Methicillin-ResistantAntibiotics (Basel, Switzerland) · 2020
    Review
  17. Review
  18. Review
  19. A Novel View of HumanBiomolecules · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Tiziana AngrisanoDipartimento di Biologia, Università degli Studi di Napoli "Federico II", Monte Sant'Angelo via Cintia 21, 80126 Naples, Italy.
Raffaela PeroDipartimento di Medicina Molecolare e Biotecnologie Mediche, via S. Pansini, 5, 80131 Naples, Italy.
Mariarita BrancaccioDipartimento di Medicina Molecolare e Biotecnologie Mediche, via S. Pansini, 5, 80131 Naples, Italy.
Lorena CorettiDipartimento di Medicina Molecolare e Biotecnologie Mediche, via S. Pansini, 5, 80131 Naples, Italy.
Ermanno FlorioDipartimento di Medicina Molecolare e Biotecnologie Mediche, via S. Pansini, 5, 80131 Naples, Italy.
Antonio PezoneDipartimento di Medicina Molecolare e Biotecnologie Mediche, via S. Pansini, 5, 80131 Naples, Italy.
Viola CalabròDipartimento di Biologia, Università degli Studi di Napoli "Federico II", Monte Sant'Angelo via Cintia 21, 80126 Naples, Italy.
Geppino FalcoDipartimento di Biologia, Università degli Studi di Napoli "Federico II", Monte Sant'Angelo via Cintia 21, 80126 Naples, Italy.
Simona KellerDipartimento di Medicina Molecolare e Biotecnologie Mediche, via S. Pansini, 5, 80131 Naples, Italy.
Francesca LemboDipartimento di Farmacia, Università degli Studi di Napoli "Federico II", via D. Montesano 47, 80131 Naples, Italy.
Vittorio Enrico AvvedimentoDipartimento di Medicina Molecolare e Biotecnologie Mediche, via S. Pansini, 5, 80131 Naples, Italy.
Lorenzo ChiariottiDipartimento di Medicina Molecolare e Biotecnologie Mediche, via S. Pansini, 5, 80131 Naples, Italy.
Ceinge Biotecnologie Avanzate (Italy) · ITUniversity of Naples Federico II · ITInstitute for Experimental Endocrinology and Oncology · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial lipopolysaccharide (LPS) induces release of inflammatory mediators both in immune and epithelial cells. We investigated whether changes of epigenetic marks, including selected histone modification and DNA methylation, may drive or accompany the activation of COX-2 gene in HT-29 human intestinal epithelial cells upon exposure to LPS. Here we describe cyclical histone acetylation (H3), methylation (H3K4, H3K9, H3K27) and DNA methylation changes occurring at COX-2 gene promoter overtime after LPS stimulation. Histone K27 methylation changes are carried out by the H3 demethylase JMJD3 and are essential for COX-2 induction by LPS. The changes of the histone code are associated with cyclical methylation signatures at the promoter and gene body of COX-2 gene.

Indexed as

CpG IslandsCyclooxygenase 2DNA MethylationEnzyme ActivationEpigenesis, GeneticEpithelial CellsGene SilencingHistonesHT29 CellsHumansIntestinesJumonji Domain-Containing Histone DemethylasesLipopolysaccharidesLysinePromoter Regions, GeneticRNA, Small InterferingCyclooxygenase 2HistonesJumonji Domain-Containing Histone DemethylasesKDM6B protein, humanLipopolysaccharidesLysinePTGS2 protein, humanRNA, Small Interfering

Identifiers

PMID27253528
PMCPMC4890762
OpenAlexW2418653358

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.