Evidence map›Paper›PMID 27253220›Full record

ArticleACS chemical neuroscience2016

Development of Sulfonamide Photoaffinity Inhibitors for Probing Cellular γ-Secretase.

Christina J Crump, Heather E Murrey, T Eric Ballard, Christopher W Am Ende, Xianzhong Wu, Natalya Gertsik, Douglas S Johnson, Yue-Ming Li

Abstract read
In one paragraph

Article in ACS chemical neuroscience, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. γ-Secretase in Alzheimer's disease.Experimental & molecular medicine · 2022
    Review
  4. Imaging of Cancer γ-Secretase Activity Using an Inhibitor-Based PET Probe.Clinical cancer research : an official journal of the American Association for Cancer Research · 2021
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Christina J CrumpChemical Biology Program, Memorial Sloan Kettering Cancer Center , 1275 York Avenue, New York, New York 10065, United States.
Heather E MurreyPfizer Worldwide Research and Development , Worldwide Medicinal Chemistry, Cambridge, Massachusetts 02139, United States.
T Eric BallardPfizer Worldwide Research and Development , Worldwide Medicinal Chemistry Groton, Connecticut 06340, United States.
Christopher W Am EndePfizer Worldwide Research and Development , Worldwide Medicinal Chemistry Groton, Connecticut 06340, United States.
Xianzhong WuChemical Biology Program, Memorial Sloan Kettering Cancer Center , 1275 York Avenue, New York, New York 10065, United States.
Natalya GertsikChemical Biology Program, Memorial Sloan Kettering Cancer Center , 1275 York Avenue, New York, New York 10065, United States.
Douglas S JohnsonPfizer Worldwide Research and Development , Worldwide Medicinal Chemistry, Cambridge, Massachusetts 02139, United States.
Yue-Ming LiChemical Biology Program, Memorial Sloan Kettering Cancer Center , 1275 York Avenue, New York, New York 10065, United States.
Memorial Sloan Kettering Cancer Center · USPfizer (United States) · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Regulation and Function of Gamma-SecretaseR01AG026660 · NIA · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI LI, YUEMING · 2005 to 2015
$3.5M
Mechanism and therapy of AB-42-specific gamma-secretaseR01NS076117 · NINDS · SLOAN-KETTERING INST CAN RESEARCH · PI LI, YUEMING, ZHENG, HUI · 2011 to 2015
$2.8M
Mechanism and Synergy of gamma-Secretase ModulatorsR01NS096275 · NINDS · SLOAN-KETTERING INST CAN RESEARCH · PI LI, YUEMING · 2016 to 2020
$2.1M
NCI NIH HHS P30 CA008748NIA NIH HHS R01 AG026660NINDS NIH HHS R01 NS076117NINDS NIH HHS R01 NS096275
6 · The paper itself

Abstract

γ-Secretase is a multiprotein complex that catalyzes intramembrane proteolysis associated with Alzheimer's disease and cancer. Here, we have developed potent sulfonamide clickable photoaffinity probes that target γ-secretase in vitro and in cells by incorporating various photoreactive groups and walking the clickable alkyne handle to different positions around the molecule. We found that benzophenone is preferred over diazirine as a photoreactive group within the sulfonamide scaffold for labeling γ-secretase. Intriguingly, the placement of the alkyne at different positions has little effect on probe potency but has a significant impact on the efficiency of labeling of γ-secretase. Moreover, the optimized clickable photoprobe, 163-BP3, was utilized as a cellular probe to effectively assess the target engagement of inhibitors with γ-secretase in primary neuronal cells. In addition, biotinylated 163-BP3 probes were developed and used to capture the native γ-secretase complex in the 3-[(3-cholamidopropyl)dimethylammonio]-2-hydroxy-1-propanesulfonate (CHAPSO) solubilized state. Taken together, these next generation clickable and biotinylated sulfonamide probes offer new tools to study γ-secretase in biochemical and cellular systems. Finally, the data provide insights into structural features of the sulfonamide inhibitor binding site in relation to the active site and into the design of clickable photoaffinity probes.

Indexed as

Amyloid beta-PeptidesAmyloid Precursor Protein SecretasesAnimalsBenzophenonesBinding SitesBiotinylationCatalytic DomainCells, CulturedCerebral CortexCholic AcidsDiazomethaneHeLa CellsHumansNeuronsPeptide FragmentsPhotoaffinity LabelsAmyloid beta-Peptidesamyloid beta-protein (1-42)Amyloid Precursor Protein SecretasesbenzophenoneBenzophenoneschapsoCholic AcidsDiazomethanePeptide FragmentsPhotoaffinity LabelsPresenilin-1SulfonamidesAlzheimer’s diseasebenzophenoneclickable photoaffinity probeclick walkingdiazirinepresenilinβ-amyloid

Identifiers

PMID27253220
PMCPMC5576034
OpenAlexW2442662987

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.