ArticleFrontiers in plant science2016
Transcriptomic Analysis Identifies Differentially Expressed Genes (DEGs) Associated with Bolting and Flowering in Radish (Raphanus sativus L.).
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed.
- A key gene for vernalization-independent bolting under extra-long days in biennial sugar beet.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Transcriptome and Metabolome Analyses Offer New Insights into Bolting Time Regulation in Broccoli.International journal of molecular sciences · 2025Article
- Article
- Fine mapping and analysis of candidate genes for qBT2 and qBT7.2 locus controlling bolting time in radish (Raphanus sativus L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- The Dynamic Accumulation Rules of Chemical Components during the Medicine Formation Period ofMolecules (Basel, Switzerland) · 2023Article
- Epistatic interactions among multiple copies ofAoB PLANTS · 2023Article
- The New Variation in the Promoter Region ofGenes · 2022Article
- Comparative transcriptome analysis revealed differential gene expression in multiple signaling pathways at flowering in polyploid Brassica rapa.Cell & bioscience · 2021Article
- Identification and differential expression analysis of anthocyanin biosynthetic genes in root-skin color variants of radish (Raphanus sativus L.).Genes & genomics · 2020Article
- Genome-wide identification and characterization of CONSTANS-like gene family in radish (Raphanus sativus).PloS one · 2018Article
- Non-vernalization Flowering and Seed Set of Cabbage Induced by Grafting Onto Radish Rootstocks.Frontiers in plant science · 2018Article
- Mining and expression analysis of candidate genes involved in regulating the chilling requirement fulfillment of Paeonia lactiflora 'Hang Baishao'.BMC plant biology · 2017Article
- Genome-wide identification, characterization, and evolutionary analysis of flowering genes in radish (Raphanus sativus L.).BMC genomics · 2017Article
- Transcriptomic analysis of the regulation of stalk development in flowering Chinese cabbage (Brassica campestris) by RNA sequencing.Scientific reports · 2017Article
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8 authors.
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Abstract
The transition of vegetative growth to bolting and flowering is an important process in the life cycle of plants, which is determined by numerous genes forming an intricate network of bolting and flowering. However, no comprehensive identification and profiling of bolting and flowering-related genes have been carried out in radish. In this study, RNA-Seq technology was applied to analyze the differential gene expressions during the transition from vegetative stage to reproductive stage in radish. A total of 5922 differentially expressed genes (DEGs) including 779 up-regulated and 5143 down-regulated genes were isolated. Functional enrichment analysis suggested that some DEGs were involved in hormone signaling pathways and the transcriptional regulation of bolting and flowering. KEGG-based analysis identified 37 DEGs being involved in phytohormone signaling pathways. Moreover, 95 DEGs related to bolting and flowering were identified and integrated into various flowering pathways. Several critical genes including FT, CO, SOC1, FLC, and LFY were characterized and profiled by RT-qPCR analysis. Correlation analysis indicated that 24 miRNA-DEG pairs were involved in radish bolting and flowering. Finally, a miRNA-DEG-based schematic model of bolting and flowering regulatory network was proposed in radish. These outcomes provided significant insights into genetic control of radish bolting and flowering, and would facilitate unraveling molecular regulatory mechanism underlying bolting and flowering in root vegetable crops.
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