Evidence map›Paper›PMID 27252460›Full record

ArticleJournal of clinical microbiology2016

Performance of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Aspergillus, Scedosporium, and Fusarium spp. in the Australian Clinical Setting.

Sue Sleiman, Catriona L Halliday, Belinda Chapman, Mitchell Brown, Joanne Nitschke, Anna F Lau, Sharon C-A Chen

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Review
  3. Mass spectrometry in research laboratories and clinical diagnostic: a new era in medical mycology.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Review
  4. Article
  5. Article
  6. Review
  7. Studies in mycology · 2021
    Article
  8. Rapid identification of fungi from respiratory samples by Bruker Biotyper matrix-assisted laser desorption/ionisation time-of-flight using ID-FUNGI plates.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
    Article
  9. Journal of fungi (Basel, Switzerland) · 2021
    Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Taxonomy and evolution ofComputational and structural biotechnology journal · 2018
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sue SleimanCentre for Infectious Diseases and Microbiology Laboratory Services, Institute for Clinical Pathology and Medical Research, Westmead Hospital, The University of Sydney, Westmead, New South Wales, Australia.
Catriona L HallidayCentre for Infectious Diseases and Microbiology Laboratory Services, Institute for Clinical Pathology and Medical Research, Westmead Hospital, The University of Sydney, Westmead, New South Wales, Australia.
Belinda ChapmanWestmead Institute for Medical Research, University of Sydney, Westmead, New South Wales, Australia.
Mitchell BrownCentre for Infectious Diseases and Microbiology Laboratory Services, Institute for Clinical Pathology and Medical Research, Westmead Hospital, The University of Sydney, Westmead, New South Wales, Australia.
Joanne NitschkeCentre for Infectious Diseases and Microbiology Laboratory Services, Institute for Clinical Pathology and Medical Research, Westmead Hospital, The University of Sydney, Westmead, New South Wales, Australia.
Anna F LauMicrobiology Service, Department of Laboratory Medicine, Clinical Centre, National Institutes of Health, Bethesda, Maryland, USA.
Sharon C-A ChenCentre for Infectious Diseases and Microbiology Laboratory Services, Institute for Clinical Pathology and Medical Research, Westmead Hospital, The University of Sydney, Westmead, New South Wales, Australia Marie Bashir Institute for Infectious Diseases and Biosecurity, University of Sydney, New South Wales, Australia sharon.chen@health.nsw.gov.au.

Funding

Multicenter Studies to Evaluate the Performance of MALDI-TOF MS for Fungal IdentificationZIACL060091 · CLC · CLINICAL CENTER · PI LAU, ANNA · 2014 to 2020
$0k
Novel Diagnostic Platforms for Sterility Testing of Cellular Therapies and Biopharmaceutical ProductsZIACL060092 · CLC · CLINICAL CENTER · PI LAU, ANNA · 2014 to 2025
$0k
6 · The paper itself

Abstract

We developed an Australian database for the identification of Aspergillus, Scedosporium, and Fusarium species (n = 28) by matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS). In a challenge against 117 isolates, species identification significantly improved when the in-house-built database was combined with the Bruker Filamentous Fungi Library compared with that for the Bruker library alone (Aspergillus, 93% versus 69%; Fusarium, 84% versus 42%; and Scedosporium, 94% versus 18%, respectively).

Indexed as

AspergillusAustraliaFungiFusariumMicrobiological TechniquesMycosesScedosporiumSpectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Identifiers

PMID27252460
PMCPMC4963518

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.